Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4) from Pseudomonas fluorescens FW300-N2E2

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 69/219 (31%), Positives = 115/219 (52%), Gaps = 10/219 (4%)

Query: 186 FESGSIWVL-VALIAGIIACWVLSIWATNRQRLTGQQTPMGRYILLLCVTFPVLV----- 239
           + SG  W + +A++A IIA  + SI    R       + +    + L    P+LV     
Sbjct: 25  YVSGLGWTIAIAIVAWIIALLLGSILGVMRTVPNRLVSGIATCYVELFRNVPLLVQLFIW 84

Query: 240 YFLLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQ 299
           YFL+   + A+   ++ +  Q          +++V L ++TA+ + E VR+GI A+  GQ
Sbjct: 85  YFLVPDLLPAD---MQEWYKQDLNPTTSAYLSVVVCLGLFTAARVCEQVRTGIQALPRGQ 141

Query: 300 TEAAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGT 359
             AA ++G    +    V++PQA RIIIPPLTS++LN+ KNSS+A  IG  +L++     
Sbjct: 142 ESAARAMGFKLPQIYWNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQ-TKQ 200

Query: 360 TLNQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRKVAL 398
           T   +    E  ++  L+Y TL++    LM +  +KVA+
Sbjct: 201 TAEFSANLFEAFTLATLIYFTLNMSLMLLMRMVEKKVAV 239



 Score = 65.9 bits (159), Expect = 1e-15
 Identities = 30/81 (37%), Positives = 52/81 (64%), Gaps = 5/81 (6%)

Query: 92  FLVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETFRNLPLLLQIFFW 151
           ++ GL  T  ++++  ++A +LG ++G+ R   N L+S +A  Y+E FRN+PLL+Q+F W
Sbjct: 25  YVSGLGWTIAIAIVAWIIALLLGSILGVMRTVPNRLVSGIATCYVELFRNVPLLVQLFIW 84

Query: 152 YFVVLQALPSARESMHLGEWF 172
           YF+V   LP+      + EW+
Sbjct: 85  YFLVPDLLPA-----DMQEWY 100