Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., amino acid ABC transporter membrane protein 1, PAAT family from Pseudomonas syringae pv. syringae B728a

 Score =  399 bits (1025), Expect = e-116
 Identities = 207/380 (54%), Positives = 272/380 (71%)

Query: 22  LYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFAFLEQTAGFGISQSLIP 81
           L +P  R+ +FQ++ V  +    + I +N  TNL+ RGI +GF FLE +AGFGI+Q LI 
Sbjct: 14  LSDPKVRAWLFQIITVVAVIALGWFIFDNTQTNLQHRGITSGFGFLENSAGFGIAQHLID 73

Query: 82  YDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETFRN 141
           Y E  SY R F++GLLNT LVSV+GI+LAT+LGF+IG+ARLS NW+IS+LA VY+E FRN
Sbjct: 74  YSEADSYARVFVIGLLNTLLVSVIGIVLATLLGFVIGVARLSPNWMISKLATVYVEVFRN 133

Query: 142 LPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPIFESGSIWVLVALIAGI 201
           +P LLQI FWY  V   LP  R++    + F+++ +GL + + +   G+   L++L+  +
Sbjct: 134 IPPLLQILFWYTAVFLTLPGPRQAHGYLDMFFVSSRGLNMPRALPAEGAWAFLISLVVAV 193

Query: 202 IACWVLSIWATNRQRLTGQQTPMGRYILLLCVTFPVLVYFLLGQPITAEYPVLRGFNFQG 261
           IA  ++  WA  R   TGQ        L L +  P L   + G P+  E P L+GFNF G
Sbjct: 194 IAIVMMVRWANKRFEATGQPFHKFWVGLALLLVIPGLSMLIFGSPVHWELPQLKGFNFSG 253

Query: 262 GISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMSLGLTRTKTLKLVIIPQ 321
           G  ++PEL +L +ALTIYTA+FIAEIVRSGI +VSHGQTEAA SLGL    TL+ VIIPQ
Sbjct: 254 GWVLIPELISLTLALTIYTAAFIAEIVRSGIKSVSHGQTEAARSLGLRPGPTLRKVIIPQ 313

Query: 322 ALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIISMTMLVYLTL 381
           ALR+IIPPLTSQ+LNL KNSSLA AIGYP++VS+FAGT LNQTGQAIE+I++TM VYL +
Sbjct: 314 ALRVIIPPLTSQFLNLAKNSSLAAAIGYPEMVSLFAGTVLNQTGQAIEVIAITMSVYLAI 373

Query: 382 SLLTSALMNLYNRKVALVER 401
           S+  S LMN YN+++AL+ER
Sbjct: 374 SISISLLMNWYNKRIALIER 393