Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., amino-acid transport system permease ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 83.2 bits (204), Expect = 8e-21
 Identities = 44/124 (35%), Positives = 76/124 (61%), Gaps = 1/124 (0%)

Query: 273 LVALTIYTASFIAEIVRSGINAVSHGQTEAAMSLGLTRTKTLKLVIIPQALRIIIPPLTS 332
           ++AL I  ++FIAE+ R+GI +V  GQ EAA +LGL+R +  +LV+ PQA+R+I+PPL +
Sbjct: 145 IMALMIGYSAFIAEVFRAGIQSVDKGQVEAAKALGLSRYQRFRLVVFPQAIRVILPPLGN 204

Query: 333 QYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIISMTMLVYLTLSLLTSALMNLY 392
            ++ + K+SSL   +G  D+  +      + + +  E  S+   VYL L++  S  +   
Sbjct: 205 DFVAMVKDSSLVSVLGVADITQM-GKVYASGSFRFFETYSIVAYVYLVLTIGLSLALRAV 263

Query: 393 NRKV 396
            R++
Sbjct: 264 ERRL 267



 Score = 47.4 bits (111), Expect = 5e-10
 Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 17/113 (15%)

Query: 93  LVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETFRNLPLLLQIFFWY 152
           L GL  T  V+++G +LAT+LG  + +  LS + ++ ++A  Y E  R +P+L+ +F+  
Sbjct: 47  LKGLGVTVFVTLVGFVLATVLGLGVALMALSEHVVLRQIARFYTEVIRGVPILVLLFYIA 106

Query: 153 FVVLQALPSARESMHLGEWFYLNIKGLYLAKPIFESGSIWVLVALIAGIIACW 205
           FV   AL +                  ++A P+  +G  W+   ++  +   W
Sbjct: 107 FVGAPALVTVAN---------------FVAAPLISAG--WIEPFVVRDVSLMW 142