Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  367 bits (943), Expect = e-106
 Identities = 188/382 (49%), Positives = 265/382 (69%), Gaps = 1/382 (0%)

Query: 20  NLLYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFAFLEQTAGFGISQSL 79
           +++ +P  R + +Q + + +LA  +Y IV+N + NL    IA+G+ F+   AGF + QSL
Sbjct: 17  SIINDPQVRGIFYQAITIIILAALIYWIVDNTVDNLRRANIASGYDFVRSRAGFDVGQSL 76

Query: 80  IPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETF 139
           I +    +YGR  LVG +NT LV++ GI+ ATI+GF++GI RLS NW+I++L+  Y+E F
Sbjct: 77  ISFTSDSTYGRALLVGFINTLLVAITGIITATIIGFIVGIGRLSHNWIIAKLSLAYVEVF 136

Query: 140 RNLPLLLQIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPIFESGSIWVLVALIA 199
           RN+P LL IFFWY  VL  LP AR+++ L    +L+ +G+   +PI E G+ + L+A + 
Sbjct: 137 RNIPPLLVIFFWYSGVLSILPQARDALALPFDIFLSNRGVAFPRPIAEEGAEYTLLAFVI 196

Query: 200 GIIACWVLSIWATNRQRLTGQQTPMGRYILLLCVTFPVLVYFLLGQPITAEYPVLRGFNF 259
            + A    + +A  RQ  TG++ P+   +L L +  P++ + + G PIT + PV   FN 
Sbjct: 197 AVAASVFFARYARKRQLATGERLPVLWTVLGLIIGLPLVTFLVTGAPITFDIPVAGKFNL 256

Query: 260 QGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMSLGLTRTKTLKLVII 319
            GG  V PE  +L +AL+ YTA+FIAEIVR+GI  VS GQTEAA +LG+    T +LV++
Sbjct: 257 TGGSVVGPEFMSLFLALSFYTAAFIAEIVRAGIRGVSKGQTEAAHALGIRPALTTRLVVV 316

Query: 320 PQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIISMTMLVYL 379
           PQA+RIIIPPLTSQYLNLTKNSSLA+AIGY DLV+V  GT LNQTGQ+IEI+S+ ++VYL
Sbjct: 317 PQAMRIIIPPLTSQYLNLTKNSSLAVAIGYADLVAV-GGTILNQTGQSIEIVSIWLIVYL 375

Query: 380 TLSLLTSALMNLYNRKVALVER 401
           +LSL TS  MN YN ++ALVER
Sbjct: 376 SLSLATSLFMNWYNARMALVER 397