Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., ABC transporter permease subunit from Rhodopseudomonas palustris CGA009

 Score =  392 bits (1007), Expect = e-113
 Identities = 199/370 (53%), Positives = 276/370 (74%)

Query: 27  FRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFAFLEQTAGFGISQSLIPYDETY 86
           ++ ++ Q+L V  L +  Y IV+NA  NL ++ IA+GFAF+  TAGFG+SQ+LIPY E+ 
Sbjct: 26  WKGLLAQVLFVAALFWIGYEIVDNARDNLANQRIASGFAFMSHTAGFGVSQTLIPYQESD 85

Query: 87  SYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETFRNLPLLL 146
           SY R FLVGL+NT +VSV+GI  AT++GF + +ARLS NWLISR+   Y+E  RNLPLL 
Sbjct: 86  SYTRVFLVGLINTLVVSVVGIFFATVIGFAVALARLSPNWLISRIGGGYVEIVRNLPLLF 145

Query: 147 QIFFWYFVVLQALPSARESMHLGEWFYLNIKGLYLAKPIFESGSIWVLVALIAGIIACWV 206
           QI FWY  VL +LPS R+S+ + + F+L+ +G+ + +   E+G    LVAL+  + A  V
Sbjct: 146 QILFWYLAVLGSLPSPRQSVSVMDSFFLSNRGIVVPRLAGEAGLDGFLVALLIAVAAAIV 205

Query: 207 LSIWATNRQRLTGQQTPMGRYILLLCVTFPVLVYFLLGQPITAEYPVLRGFNFQGGISVL 266
           L ++A  R   TG+   +  ++L L +  P++ + ++G+P + E PVLRGFNF GG  + 
Sbjct: 206 LPLYARRRLFATGKPMRVWPWVLGLLIGLPLIAFVIVGKPFSLEVPVLRGFNFVGGSRIA 265

Query: 267 PELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMSLGLTRTKTLKLVIIPQALRII 326
           PE  AL +AL+ YTA+FIAE+VR+GI +V  GQ EA  SLGL+R +TL+L++IPQA+R+I
Sbjct: 266 PEFVALTLALSTYTAAFIAEVVRAGILSVHKGQMEAGASLGLSRGQTLRLIVIPQAMRVI 325

Query: 327 IPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIISMTMLVYLTLSLLTS 386
           +PPLT+QYLNLTKNSSLA+AIGYPDL SVFAGTTL+QTGQAIE+I++TM VYL +SL+TS
Sbjct: 326 LPPLTNQYLNLTKNSSLAVAIGYPDLFSVFAGTTLSQTGQAIEVIAITMGVYLLISLVTS 385

Query: 387 ALMNLYNRKV 396
           ALM+LY  ++
Sbjct: 386 ALMSLYGWRI 395