Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., amino acid ABC transporter, permease protein from Phaeobacter inhibens DSM 17395

 Score = 85.5 bits (210), Expect = 2e-21
 Identities = 45/128 (35%), Positives = 77/128 (60%), Gaps = 1/128 (0%)

Query: 267 PELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMSLGLTRTKTLKLVIIPQALRII 326
           P L   ++AL I  ++FI+E+ R+G+ +V  GQ EAA SLGL+R    + ++ PQA+R I
Sbjct: 138 PLLWRAIIALMIAYSAFISEVFRAGLQSVDEGQIEAAKSLGLSRWHRFRFIVFPQAIRTI 197

Query: 327 IPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIISMTMLVYLTLSLLTS 386
           +PPL + ++ L K+SSL   +G  D+  +   T +    +  E  ++  L+YLTL++  S
Sbjct: 198 LPPLGNDFVALVKDSSLVSVLGVADVTQLGKLTAVGNF-RYFETYNVVALIYLTLTIGLS 256

Query: 387 ALMNLYNR 394
            L+  + +
Sbjct: 257 LLLRRFEK 264



 Score = 42.0 bits (97), Expect = 2e-08
 Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 91  TFLVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAA-VYIETFRNLPLLLQIF 149
           T + G+  T  V+++   LA++LG  + +A   S WL+ R  A  YIE  R +P+++ + 
Sbjct: 48  TLMRGVQLTIFVTLISFFLASLLGLGLALAA-GSRWLVIRQGARFYIEVVRGIPIIVLLL 106

Query: 150 FWYFVVLQALPSARESM--HLG 169
           +  FV+  AL   R  +  H+G
Sbjct: 107 YVAFVLAPALVELRNWLGDHIG 128



 Score = 29.3 bits (64), Expect = 1e-04
 Identities = 19/61 (31%), Positives = 31/61 (50%)

Query: 89  GRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETFRNLPLLLQI 148
           G  F+  + +++LVSVLG+   T LG L  +         + +A +Y+     L LLL+ 
Sbjct: 202 GNDFVALVKDSSLVSVLGVADVTQLGKLTAVGNFRYFETYNVVALIYLTLTIGLSLLLRR 261

Query: 149 F 149
           F
Sbjct: 262 F 262