Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Dechlorosoma suillum PS

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 71/245 (28%), Positives = 122/245 (49%), Gaps = 19/245 (7%)

Query: 154 VVLQALPSARESMHLGEWFYLNIKGLYLAKPIFESGSIWVLVALIAGIIACW--VLSIWA 211
           V L  +PS  E+ +LG W +  ++       +  S S WV+  ++  I+     V + W 
Sbjct: 9   VFLTPVPSG-ETTYLG-WLFTGLQWT-----VALSLSAWVIALVVGSIVGVLRTVPNRWL 61

Query: 212 TNRQRLTGQQTPMGRYILLLCVTFPVLVYFLLGQPITAEYPVLRGFNFQGGISVLPELAA 271
           +             R + LL   F    YF+L + +    P   G  ++    +L +  A
Sbjct: 62  SG---FAAVYVECFRNVPLLVQLFSW--YFVLPELL----PPALGNAYKQSDPLLQQFLA 112

Query: 272 LLVALTIYTASFIAEIVRSGINAVSHGQTEAAMSLGLTRTKTLKLVIIPQALRIIIPPLT 331
            ++ L ++TA+ +AE VR+GI ++  GQ  A +++G T  +  + V++P A RII+PPLT
Sbjct: 113 AMLCLGLFTAARVAEQVRAGIESLPRGQRNAGLAMGFTLAQVYRHVLLPMAFRIIVPPLT 172

Query: 332 SQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIISMTMLVYLTLSLLTSALMNL 391
           S++LN+ KNS++A  IG  +L S  A   ++ T Q  E      L+Y+ +++    LM  
Sbjct: 173 SEFLNIFKNSAVATTIGLIEL-SRQAQQLVDYTAQPYEAFIAVTLLYVCINVTVMFLMRR 231

Query: 392 YNRKV 396
              KV
Sbjct: 232 LEEKV 236



 Score = 67.0 bits (162), Expect = 5e-16
 Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 1/83 (1%)

Query: 80  IPYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETF 139
           +P  ET   G  F  GL  T  +S+   ++A ++G ++G+ R   N  +S  AAVY+E F
Sbjct: 14  VPSGETTYLGWLF-TGLQWTVALSLSAWVIALVVGSIVGVLRTVPNRWLSGFAAVYVECF 72

Query: 140 RNLPLLLQIFFWYFVVLQALPSA 162
           RN+PLL+Q+F WYFV+ + LP A
Sbjct: 73  RNVPLLVQLFSWYFVLPELLPPA 95