Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 55/158 (34%), Positives = 91/158 (57%), Gaps = 8/158 (5%)

Query: 238 LVYFLLGQPITAEYPVLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSH 297
           L YF++G  + A +  +       G+S +P L   ++AL I+T +++AEIVR+GI +V  
Sbjct: 185 LWYFVVGTLLNALFEKV-------GLSAIPPLWYGVMALAIFTGAYVAEIVRAGIQSVHR 237

Query: 298 GQTEAAMSLGLTRTKTLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFA 357
           GQ EAA SLG++  ++++ VI+PQA R I+PPL  Q+++L K+SSL   I   +L     
Sbjct: 238 GQMEAARSLGMSYAQSMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAVRELTKA-T 296

Query: 358 GTTLNQTGQAIEIISMTMLVYLTLSLLTSALMNLYNRK 395
              +  + Q  E+  +  L+YL L+   S  +    R+
Sbjct: 297 REVVTTSLQPFELWIVCALLYLVLTFTLSLCVQYLERR 334



 Score = 61.6 bits (148), Expect = 3e-14
 Identities = 34/76 (44%), Positives = 46/76 (60%)

Query: 93  LVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETFRNLPLLLQIFFWY 152
           L GL  T  VS+L I++  +LG + G+AR+S N  +  LA  YIE  R  PLL+Q+F WY
Sbjct: 128 LEGLWITLEVSMLAIIIGIVLGVVTGLARISVNPALRWLAITYIEIIRGSPLLVQVFLWY 187

Query: 153 FVVLQALPSARESMHL 168
           FVV   L +  E + L
Sbjct: 188 FVVGTLLNALFEKVGL 203