Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 53/131 (40%), Positives = 84/131 (64%), Gaps = 1/131 (0%)

Query: 266 LPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMSLGLTRTKTLKLVIIPQALRI 325
           L  +A+ ++AL ++  +++AEI+R+GI AV  GQ EA+ SLG+    T   VI+PQALR 
Sbjct: 138 LGRMASAVMALGVFEGAYMAEILRAGIAAVPQGQWEASRSLGMDEPGTYVQVILPQALRR 197

Query: 326 IIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIISMTMLVYLTLSLLT 385
            +PPLT Q ++L K+SSLA AI   +L ++ A T + +T    E+  +T  +YL ++L  
Sbjct: 198 ALPPLTGQAVSLVKDSSLASAIAIHEL-TMQAQTIIAETFLTFEVWLLTAAIYLCVTLSL 256

Query: 386 SALMNLYNRKV 396
           SA+  L  R++
Sbjct: 257 SAVARLLERRM 267



 Score = 38.1 bits (87), Expect = 3e-07
 Identities = 23/63 (36%), Positives = 35/63 (55%)

Query: 93  LVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETFRNLPLLLQIFFWY 152
           L GL  T  V+   ++LA +L  +    RLS       +A +Y+E+ RN PLL+Q+F  Y
Sbjct: 70  LQGLGVTLQVAAGSLVLALLLAAVAVALRLSCLRTGRLVARLYVESVRNTPLLVQLFVTY 129

Query: 153 FVV 155
           F +
Sbjct: 130 FAI 132