Pairwise Alignments

Query, 401 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., polar amino acid ABC transporter, inner membrane subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  326 bits (836), Expect = 7e-94
 Identities = 180/389 (46%), Positives = 246/389 (63%), Gaps = 8/389 (2%)

Query: 21  LLYNPTFRSVVFQLLAVCVLAFFLYTIVNNALTNLESRGIATGFAFLEQTAGFGISQSLI 80
           L+ +  +R   FQ +A+  L FF   +V+NA+ NL + G    F+FL Q A + I Q+LI
Sbjct: 23  LINDTRYRGYTFQFIALIALIFFFGWLVSNAIYNLAALGQDINFSFLGQPASYEIDQTLI 82

Query: 81  PYDETYSYGRTFLVGLLNTALVSVLGILLATILGFLIGIARLSSNWLISRLAAVYIETFR 140
           PY  T ++ R   VGLLNT LV+ LG + ATI G L G+ RLS NWL++++ +VY+E FR
Sbjct: 83  PYTSTDTHMRAAFVGLLNTLLVAFLGCITATIFGVLAGVLRLSKNWLVAKVMSVYVEIFR 142

Query: 141 NLPLLLQIFFWYFVVLQALPSARE--------SMHLGEWFYLNIKGLYLAKPIFESGSIW 192
           N+P+L+ I     V+ QALP  R         +M L +      +G+Y+  P++  GS  
Sbjct: 143 NIPVLIWIVIISAVMSQALPQPRAFRGEDATATMVLWDSVAFTNRGVYIPAPVWNPGSGI 202

Query: 193 VLVALIAGIIACWVLSIWATNRQRLTGQQTPMGRYILLLCVTFPVLVYFLLGQPITAEYP 252
           V+   +  II  +V   +A N    TG+  P+GR  L +     +L +F++G+PI  +YP
Sbjct: 203 VVAVFVLSIIGIFVFRRYAKNLLFNTGKLLPVGRISLAIFFVPTLLAFFVMGRPIGLDYP 262

Query: 253 VLRGFNFQGGISVLPELAALLVALTIYTASFIAEIVRSGINAVSHGQTEAAMSLGLTRTK 312
            L GFNF+GGI++   L AL  AL +YT +FIAE VR+GI AVS GQTEAA +LG+   +
Sbjct: 263 ELGGFNFRGGINIRGTLIALWFALALYTGAFIAENVRAGILAVSKGQTEAAAALGMRPNR 322

Query: 313 TLKLVIIPQALRIIIPPLTSQYLNLTKNSSLAMAIGYPDLVSVFAGTTLNQTGQAIEIIS 372
            + L+I+PQALR+IIPP+ SQYLNLTKNSSLA AIGY DL     G TLNQTG++ E + 
Sbjct: 323 IMSLIILPQALRVIIPPVISQYLNLTKNSSLAAAIGYMDLTGTLGGVTLNQTGRSFECVL 382

Query: 373 MTMLVYLTLSLLTSALMNLYNRKVALVER 401
           + ML YL +SL  SALMNLYN  V L ER
Sbjct: 383 LLMLFYLLISLSISALMNLYNNAVKLKER 411