Pairwise Alignments

Query, 365 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., ABC transporter for D-Alanine, permease component 1 (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  467 bits (1201), Expect = e-136
 Identities = 225/365 (61%), Positives = 276/365 (75%)

Query: 1   MATHQFQPSLPPPSNTTGVVGWLRKNLFNGVFNSIATLVLGYLAIQGLLNILDWAIFNAN 60
           M TH F+P +PPP ++ GVV W+R N+F+   N++ TL   YL    +  ++ WAI +AN
Sbjct: 1   MTTHTFKPDMPPPGSSIGVVAWMRANMFSSWINTLLTLFAFYLIYLIVPPLVQWAILDAN 60

Query: 61  WSGTTRNDCTLEGACWVFISVRWEQFMYGFYPAAELWRPRLFFFTLALFVALLAYEKTPK 120
           W GTTR DCT EGACWVFI  R+ QFMYG+YPA   WR  L  +   + VA L   + P+
Sbjct: 61  WVGTTRADCTKEGACWVFIQQRFGQFMYGYYPADLRWRVDLTVWLAVIGVAPLFISRFPR 120

Query: 121 RGWIWLVFVNIYPFFAALLLYGGVFGLEVVETHKWGGLLVTLIIALVGIIASLPIGVALA 180
           +    L F+ +YP  A  LL+GGVFGL+ V T +WGGL++TL+IA VGI+ +LP+G+ LA
Sbjct: 121 KAIYGLSFLVLYPISAWCLLHGGVFGLDAVATSQWGGLMLTLVIATVGIVGALPLGIVLA 180

Query: 181 LGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMASVMLPLFLSQGSEIDKLLRALIGVVMF 240
           LGRRS+MP IR +C  +IE WRGVPLITVLFM+SVMLPLFL +G   DKLLRALIGV++F
Sbjct: 181 LGRRSNMPAIRVVCVTFIEFWRGVPLITVLFMSSVMLPLFLPEGMNFDKLLRALIGVILF 240

Query: 241 SAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNTFIGLFK 300
            +AY+AEV+RGGLQAIPKGQYEAA A+GL YW+ MGL+ILPQALK+ IP IVNTFI LFK
Sbjct: 241 QSAYIAEVVRGGLQAIPKGQYEAAAAMGLGYWRSMGLVILPQALKLVIPGIVNTFIALFK 300

Query: 301 DTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYVFVALVFWIFCFGMSRYSIWLEGKLH 360
           DTSLV+IIG+FD+L   + A  DP WLG ATE YVF ALVFWIFCFGMSRYS+ LE KL 
Sbjct: 301 DTSLVIIIGLFDLLNSVKQAAADPKWLGMATEGYVFAALVFWIFCFGMSRYSMHLERKLD 360

Query: 361 TGHKR 365
           TGHKR
Sbjct: 361 TGHKR 365