Pairwise Alignments

Query, 365 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, permease component 2 (from data) from Sinorhizobium meliloti 1021

 Score =  376 bits (966), Expect = e-109
 Identities = 197/363 (54%), Positives = 244/363 (67%), Gaps = 21/363 (5%)

Query: 11  PPPSNTTGVVGWLRKNLF----NGVFNSIATLVLGYLAIQGLLNILDWAIFNANWSGTTR 66
           P PS  +G V WLRKNLF    +     I+ L+L +L    +     W   +A WSG  R
Sbjct: 18  PAPSLESGAVSWLRKNLFATPKDTALTIISLLILAWLVPPAI----QWLFIDAAWSGGGR 73

Query: 67  NDCTL-----------EGACWVFISVRWEQFMYGFYPAAELWRPRLFFFTLALFVALLAY 115
             C              GACW F++ ++ QF++G YP  E WRP L      L +  +  
Sbjct: 74  GVCATLSQGGSQPEGWSGACWAFVNAKFAQFLFGRYPLDERWRPALVGILFVLLLVPMLI 133

Query: 116 EKTPKRGWIWLVFVNIYPFFAALLLYGGVFGLEVVETHKWGGLLVTLIIALVGIIASLPI 175
            + P +G   L+ +   P  +A+LL GG FGL  VET  WGGL+VTL+++ VGI  SLP+
Sbjct: 134 PRIPYKGLNALLLLVALPILSAILLPGGWFGLTYVETPLWGGLMVTLVLSFVGIAVSLPL 193

Query: 176 GVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMASVMLPLFLSQGSEIDKLLRALI 235
           G+ LALGRRS+MP+I+ LCTV+IEV RGVPLITVLFMASVMLPLFL QG   DK LRALI
Sbjct: 194 GILLALGRRSNMPVIKMLCTVFIEVIRGVPLITVLFMASVMLPLFLPQGVTFDKFLRALI 253

Query: 236 GVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNTF 295
           GV +F++AYMAEV+RGGLQAIPKGQYE AD+LGLS+W+KMG I+LPQALK+ IP IVNTF
Sbjct: 254 GVSLFASAYMAEVVRGGLQAIPKGQYEGADSLGLSFWQKMGFIVLPQALKLVIPGIVNTF 313

Query: 296 IGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFAT--ESYVFVALVFWIFCFGMSRYSI 353
           IGLFKDTSLV IIGMFD+LGI +   +D NW    T     +F   VFW+FCFGMSRYS 
Sbjct: 314 IGLFKDTSLVSIIGMFDLLGIVRLNFSDTNWATAVTPLTGLIFAGFVFWLFCFGMSRYSG 373

Query: 354 WLE 356
           ++E
Sbjct: 374 FME 376