Pairwise Alignments

Query, 365 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., glutamate/glutamine/aspartate/asparagine transport system permease protein BztC from Phaeobacter inhibens DSM 17395

 Score =  287 bits (734), Expect = 4e-82
 Identities = 173/420 (41%), Positives = 237/420 (56%), Gaps = 70/420 (16%)

Query: 8   PSLPPPSNTTGVVGWLRKNLFNGVFNSIATLVLGYLAIQGLLNILDWAIFNANWSGTTRN 67
           P  PPP   TGV  W+R+NLF+ V NSI TL    L    L + L W + N  W+  +  
Sbjct: 18  PPAPPPGRETGVYKWIRENLFSSVPNSILTLAALALIYALLSSTLPW-LLNGVWTTNSLA 76

Query: 68  DC--TLEG---ACWVFISVRWEQFMYGF-YPAAELWRPRLFFFTLALFVALLAYEKTPKR 121
           +C   L+G   AC+  ++ RW Q +YGF YP  E WRP L    L + +A + +   P++
Sbjct: 77  ECREVLDGKLGACFSVLTERWNQLLYGFKYPGTEYWRPNLALVLLLVALAPVLFFDLPRK 136

Query: 122 GWIWLVFVNIYPFFAALLLYG------------------------------GVFGLEVVE 151
               L F  IYPF A  L++G                              G FG  V  
Sbjct: 137 ---LLAFTAIYPFLAFWLIWGGSILVPIVALLGFVAAGFVFQKFGKGSFALGFFGAIVAA 193

Query: 152 THKW-------------------------GGLLVTLIIALVGIIASLPIGVALALGRRSD 186
              W                         GG ++ +++ +  +  S+P+G+ALALGR+S+
Sbjct: 194 VVVWNIGGFLIPEGASDNAMLSAVPSRDLGGFMLNMMLGVTCVSLSVPLGIALALGRQSN 253

Query: 187 MPIIRSLCTVYIEVWRGVPLITVLFMASVMLPLFLSQGSEIDKLLRALIGVVMFSAAYMA 246
           MP+I+ +C V+IE  RGVPLIT+LF+ASVML  F    + +D  LR +I + +FSAAY+A
Sbjct: 254 MPLIKWICVVFIEFVRGVPLITLLFVASVMLSYFFPPDATVDLFLRVVIMITLFSAAYIA 313

Query: 247 EVIRGGLQAIPKGQYEAADALGLSYWKKMGLIILPQALKITIPSIVNTFIGLFKDTSLVL 306
           EVIRGGL A+PKGQYEAAD+LGL Y + M LIILPQALKI+IP IVN  +GLFKDT+LV 
Sbjct: 314 EVIRGGLAALPKGQYEAADSLGLDYPQAMRLIILPQALKISIPGIVNVAVGLFKDTTLVS 373

Query: 307 IIGMFDVLGIGQS---ANTDPNWLGFATESYVFVALVFWIFCFGMSRYSIWLEGKLHTGH 363
           +I MFD++G+ +    A+T+  W G   E   F A +F+I C+G+S+YS WLE +L T H
Sbjct: 374 VISMFDLVGMIRGPILASTE--WNGVYWELLGFAAFLFFIVCYGISQYSQWLERRLATDH 431