Pairwise Alignments

Query, 365 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Dechlorosoma suillum PS

 Score =  122 bits (307), Expect = 7e-33
 Identities = 72/198 (36%), Positives = 111/198 (56%), Gaps = 7/198 (3%)

Query: 157 GLLVTLIIALVGIIASLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMASVM 216
           GLLVTL + L  I+  +  G  LA+ R S   ++  L   Y+ ++R VPL+ V+    ++
Sbjct: 19  GLLVTLEVTLTAIVVGIGWGTLLAVARLSSNRLLSFLAAGYVNLFRSVPLVMVILWFYLI 78

Query: 217 LPLFLSQ--GSEID--KLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYW 272
           +P  L    G +I   +L+ AL+   +F AAY +E+IR G+Q++PKGQ  A  ALGL+  
Sbjct: 79  VPQALKGLFGQDIGDIRLVSALVAFALFEAAYYSEIIRAGIQSVPKGQVAAGLALGLTPG 138

Query: 273 KKMGLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATE 332
           + M L++LPQA +  IP ++   I LF+DTSLV +IG+ D  G            G   E
Sbjct: 139 QTMRLVVLPQAFRNMIPLLLTQAIILFQDTSLVYVIGLSDFFGTAYKVGDRD---GRLVE 195

Query: 333 SYVFVALVFWIFCFGMSR 350
             +F    +++ CF +SR
Sbjct: 196 LLLFAGAAYFVICFTVSR 213