Pairwise Alignments

Query, 365 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  133 bits (334), Expect = 5e-36
 Identities = 75/204 (36%), Positives = 124/204 (60%), Gaps = 4/204 (1%)

Query: 156 GGLLVTLIIALVGIIASLPIGVALALGRRSDMPIIRSLCTVYIEVWRGVPLITVLFMASV 215
           GG+ +++++A+ GI  +  +G+A  L R S+   +R+   VY+EV RG+PL+ ++F    
Sbjct: 24  GGMAMSILLAIGGIFGAFWLGLAFGLMRLSEKWWVRAPAIVYVEVIRGIPLLMLIFWFYF 83

Query: 216 MLPLFLSQGSEIDKLLRALIGVVMFSAAYMAEVIRGGLQAIPKGQYEAADALGLSYWKKM 275
           + P+ L  G  + +   ALI  ++F+ AY+AE++R G+ A+P GQ EAA   GLS  + M
Sbjct: 84  LAPIAL--GHTLPEAESALIAFIVFTGAYIAEIVRAGVLALPAGQMEAARGTGLSKTQAM 141

Query: 276 GLIILPQALKITIPSIVNTFIGLFKDTSLVLIIGMFDVLGIGQSANTDPNWLGFATESYV 335
             +ILPQAL+  IPS VN F+ L KDTSL  IIG+ ++       N     L   TE ++
Sbjct: 142 LFVILPQALRNMIPSFVNQFVSLTKDTSLAYIIGVSELTRTATQVNN--RTLTAPTEIFL 199

Query: 336 FVALVFWIFCFGMSRYSIWLEGKL 359
            +AL++++ C+ ++  S  LE ++
Sbjct: 200 TIALMYFVICWVLTATSRRLEKQM 223