Pairwise Alignments

Query, 397 a.a., ribosomal RNA large subunit methyltransferase I from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., Predicted SAM-dependent methyltransferases from Pseudomonas stutzeri RCH2

 Score =  222 bits (565), Expect = 2e-62
 Identities = 138/400 (34%), Positives = 212/400 (53%), Gaps = 13/400 (3%)

Query: 3   PAIYLVKGRDKSLRRKHPWVFSRGISKVEGTPKLG----ETVDVYSFEGKWLAKAAYSPH 58
           P++ L    D+ LR  H WV+S  +     TP  G    +   + +  GK L     SP+
Sbjct: 4   PSLRLKANADRRLRAGHLWVYSNEVDTA-ATPLAGFVAGDQAVLEAAGGKPLGIVGVSPN 62

Query: 59  SQITARVWSFE-QEPIDRDFFIKRIEQAQLLRNDIIERDGLTGYRLIAAESDGLPGITID 117
           + I AR+ S + +  +D+   + RI+ A  LR  + E+     YRL+  +SD LPG+ +D
Sbjct: 63  NLICARLLSRDLKHSLDKSLLVHRIKVALSLRERLFEQPC---YRLVYGDSDLLPGLVVD 119

Query: 118 KYQDYLVCQLLSAGAEYQKQTLVEALLHCFPECHIYERSDVAVRKKEGLDERVGVLHGEL 177
           ++ D LV QL SA  E  K  ++EAL+       +  ++D + R  EGL+  V    G +
Sbjct: 120 RFFDILVVQLASATMERNKDAVLEALVQVLKPSGVLWKNDSSARDAEGLERYVDTAFGVV 179

Query: 178 PPKSVVIEENGVKISVDIVGGHKTGFYLDQRDSRFQSMKYVKEKEVLNCFSYTGGFGLYA 237
           P + V +EENGVK    ++ G KTG++ D R +R +   YVK K VL+ FSY GG+G+ A
Sbjct: 180 P-EWVALEENGVKFEAPVMQGQKTGWFYDHRMNRARLAPYVKGKRVLDLFSYIGGWGVQA 238

Query: 238 LKGGAKRVINADVSQPALDTAKFNAELNGFDISKKRAVFLNADVFKLLREYRDQGTRFDV 297
              GA  V   D S  ALD  + NA LNG     ++   +  D F+ ++E ++   RF+V
Sbjct: 239 AAFGASEVFCVDASAFALDGVERNAALNGV---AEKMTCVEGDAFEAMKELKNAEERFEV 295

Query: 298 VVMDPPKFAESKAQLDGACRGYKDINMLAMQILNPGGTLLTYSCSGLMDQVLFQKIIADA 357
           V+ DPP F + K  L      Y+ +N  AM++LN  G L++ SCS  + +   Q I+  +
Sbjct: 296 VITDPPAFIKRKKDLKNGEAAYRRLNEAAMRLLNKDGILVSASCSMHLPEDDLQNILLGS 355

Query: 358 ALDAGRDVKFVERFEQAADHPTDTAYPEGFYLKGFACKVL 397
           A    R+++ +ER  Q  DHP   A PE  Y+K   C++L
Sbjct: 356 ARHLDRNIQLLERGAQGPDHPVHPAIPETRYIKSLTCRIL 395