Pairwise Alignments

Query, 397 a.a., ribosomal RNA large subunit methyltransferase I from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., putative SAM-dependent methyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  503 bits (1294), Expect = e-147
 Identities = 247/397 (62%), Positives = 303/397 (76%), Gaps = 3/397 (0%)

Query: 1   MTPAIYLVKGRDKSLRRKHPWVFSRGISKVEGTPKLGETVDVYSFEGKWLAKAAYSPHSQ 60
           M+  I L  GR+KSL R+HPWVFS G+  ++G P  GETVDV + +G+WL + A+S  SQ
Sbjct: 1   MSIRIKLKPGREKSLDRRHPWVFSSGVHNIKGKPLRGETVDVVAHDGRWLGRGAWSDASQ 60

Query: 61  ITARVWSFE-QEPIDRDFFIKRIEQAQLLRNDIIERDGLTGYRLIAAESDGLPGITIDKY 119
           I  RVW+F+ +E IDRDFF +RI +AQ  R  +I   GLTGYRL+ AESDGLPGITID+Y
Sbjct: 61  IQVRVWTFDKEEAIDRDFFARRIARAQAGREALIREKGLTGYRLVGAESDGLPGITIDRY 120

Query: 120 QDYLVCQLLSAGAEYQKQTLVEALLHCFPECHIYERSDVAVRKKEGLDERVGVLHGELPP 179
            + LVCQLLSAGA+Y ++TLV  L   FPEC IYERSDV  RKKEGL    G+LHGELP 
Sbjct: 121 ANVLVCQLLSAGADYWRETLVSVLAEQFPECAIYERSDVDSRKKEGLPLVTGLLHGELPA 180

Query: 180 KSVVIEENGVKISVDIVGGHKTGFYLDQRDSRFQSMKYVKEKEVLNCFSYTGGFGLYALK 239
             ++IEENG+KI+VD+  GHKTGFYLDQRD+R  + ++V+ K VLNCF YTG FGLYA K
Sbjct: 181 MPLIIEENGIKIAVDVEKGHKTGFYLDQRDNRAMAGRFVEGKSVLNCFCYTGTFGLYAAK 240

Query: 240 GGAKRVINADVSQPALDTAKFNAELNGFDISKKRAVFLNADVFKLLREYRDQGTRFDVVV 299
            GA  + N DVS  ALDTA+ N  +NG  ++     +  ADVFKLLR+YRD+G  FDV+V
Sbjct: 241 AGAASIENVDVSTLALDTARHNMAING--LNDDHVTYSEADVFKLLRQYRDEGKTFDVIV 298

Query: 300 MDPPKFAESKAQLDGACRGYKDINMLAMQILNPGGTLLTYSCSGLMDQVLFQKIIADAAL 359
           +DPPKFA++KAQL+GACRGYKDINM+AMQ+L PGGTLLT+SCSGLM   LFQKI+ADAAL
Sbjct: 299 LDPPKFADNKAQLNGACRGYKDINMIAMQLLKPGGTLLTFSCSGLMPADLFQKIVADAAL 358

Query: 360 DAGRDVKFVERFEQAADHPTDTAYPEGFYLKGFACKV 396
           DAGRD +F+ER  QA+DHP   A+PEGFYLKG   +V
Sbjct: 359 DAGRDAQFIERLSQASDHPIGAAFPEGFYLKGLVARV 395