Pairwise Alignments

Query, 397 a.a., ribosomal RNA large subunit methyltransferase I from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  182 bits (462), Expect = 2e-50
 Identities = 129/394 (32%), Positives = 187/394 (47%), Gaps = 16/394 (4%)

Query: 3   PAIYLVKGRDKSLRRKHPWVFSRGISKVEGTPKL--GETVDVYSFEGKWLAKAAYSPHSQ 60
           P I L+ G  K LR+ HPWVFS  I+       +  G  V +     + LA A ++PHS 
Sbjct: 26  PEIRLLAGHSKRLRQGHPWVFSNEIAMTPEAKAMTPGALVTLRDAGDEPLAIATFNPHSL 85

Query: 61  ITARVWSFEQ-EPIDRDFFIKRIEQAQLLRNDIIERDGLTGYRLIAAESDGLPGITIDKY 119
           I ARV   +    I +++   R+++A  LR+ + ++     YRL+  E+DGLPG+ +D+ 
Sbjct: 86  IAARVLDRDLGASITKEWVFVRLQRALRLRDTLFDQPY---YRLVHGEADGLPGLVVDRL 142

Query: 120 QDYLVCQLLSAGAEYQKQTLVEALLHCFPECHIYERSDVAVRKKEGLDERVGVLHGELPP 179
            D +  Q  SAG +     +++A+ +      I   +D  VR  EGL +   +  G++  
Sbjct: 143 GDVIAVQANSAGMDLLTPLILDAIENLLAPRAIVLINDAPVRLLEGLTQETALARGQIDG 202

Query: 180 KSVVIEENGVKISVDIVGGHKTGFYLDQRDSRFQSMKYVKEKEVLNCFSYTGGFGLYALK 239
              VIE NG     D+  G KTG++ DQR +R       + + VL+ +SY GGFGL AL 
Sbjct: 203 PVPVIE-NGFSYLADLQEGQKTGWFFDQRPNRAFVADLARGRSVLDVYSYAGGFGLLALA 261

Query: 240 GGAKRVINADVSQPAL---DTAKFNAELNGFDISKKRAVFLNADVFKLLREYRDQGTRFD 296
            GA      D S   L     A   A L G   + K      A+ F  L +   +G RF 
Sbjct: 262 RGATSATLVDRSDQGLLLAQQAAATAGLGGALTTHK------AEGFAYLEQAEHEGKRFG 315

Query: 297 VVVMDPPKFAESKAQLDGACRGYKDINMLAMQILNPGGTLLTYSCSGLMDQVLFQKIIAD 356
           VVV DPP FA+++       +GY+ +  LA  ++ PGG L   SCS  M    FQ   A 
Sbjct: 316 VVVCDPPAFAKTRKDQASGAKGYRKVARLAAALVEPGGFLFVASCSHHMPIDRFQDETAH 375

Query: 357 AALDAGRDVKFVERFEQAADHPTDTAYPEGFYLK 390
               AGR  + +       DHP      E  YLK
Sbjct: 376 GIAQAGRTGRILRSGGAGPDHPVHPDLAESAYLK 409