Pairwise Alignments

Query, 397 a.a., ribosomal RNA large subunit methyltransferase I from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., ribosomal RNA large subunit methyltransferase I from Phaeobacter inhibens DSM 17395

 Score =  191 bits (485), Expect = 3e-53
 Identities = 134/386 (34%), Positives = 187/386 (48%), Gaps = 10/386 (2%)

Query: 9   KGRDKSLRRKHPWVFSRGISKVEGTPKLGE-TVDVYSFEGKW-LAKAAYSPHSQITARVW 66
           K   ++LR   PWV++  +     T KL   T+ V   +G   +   A +P S+I AR+ 
Sbjct: 18  KANARALRHGFPWVYANELVTDRRTRKLAPGTLAVLEDDGMTSMGLVAINPESKIIARML 77

Query: 67  SFEQEP-IDRDFFIKRIEQAQLLRNDIIERDGLTGYRLIAAESDGLPGITIDKYQDYLVC 125
             +    I++D+F  R+ +A  LR  + +      YRL  AESDGLPG+ ID++ D  V 
Sbjct: 78  DTDPAAEINQDWFETRLSRALALREQLYDAPY---YRLAHAESDGLPGVVIDRFGDTCVV 134

Query: 126 QLLSAGAEYQKQTLVEALLHCFPECHIYERSDVAVRKKEGLDERVGVLHGELPPKSVVIE 185
           Q  +A AE     L +AL+       + + +    R  EGLD+    L G  P   V + 
Sbjct: 135 QPNAAWAEAHLDALTDALVAVTGVTTVLKNASGRARSLEGLDDVSTTLRGTTPEAPVQVT 194

Query: 186 ENGVKISVDIVGGHKTGFYLDQRDSRFQSMKYVKE-KEVLNCFSYTGGFGLYALKGGAKR 244
            NG     D+ GG KTG + DQRD+   + K VK   +VL+ FS+ GGFGL  L  GA  
Sbjct: 195 MNGATYMADLTGGQKTGLFYDQRDNHAFAAKLVKPGAKVLDVFSHVGGFGLAMLAAGAAE 254

Query: 245 VINADVSQPALDTAKFNAELNGFDISKKRAVFLNADVFKLLREYRDQGTRFDVVVMDPPK 304
               D S PALD A+  A  + F     R      D F++L +  ++G +FDVV+ DPP 
Sbjct: 255 ATCVDGSAPALDLAREGAAASDF---ADRFAARQGDAFEVLTQLAEEGVQFDVVICDPPA 311

Query: 305 FAESKAQLDGACRGYKDINMLAMQILNPGGTLLTYSCSGLMDQVLFQKIIADAALDAGRD 364
           FA SK  L+   R Y+ I  LA  ++ PGG L   SCS   D   F+   A      GR 
Sbjct: 312 FAPSKQALEAGLRAYERIAKLAAPLVAPGGCLGLCSCSHAADLSRFRNASARGIGRGGRR 371

Query: 365 VKFVERFEQAADHPTDTAYPEGFYLK 390
            + +      ADHP      E  YLK
Sbjct: 372 SQLLHTGYAGADHPQLPQLAESGYLK 397