Pairwise Alignments

Query, 397 a.a., ribosomal RNA large subunit methyltransferase I from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., hypothetical SAM-dependent methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  496 bits (1278), Expect = e-145
 Identities = 243/397 (61%), Positives = 304/397 (76%), Gaps = 3/397 (0%)

Query: 1   MTPAIYLVKGRDKSLRRKHPWVFSRGISKVEGTPKLGETVDVYSFEGKWLAKAAYSPHSQ 60
           M   I L  GR+KSL R+HPWVFS GI  V+G P+ G+TVDV + +G WL + A+S  SQ
Sbjct: 1   MAIRIKLKPGREKSLERRHPWVFSNGIHNVKGKPEPGQTVDVVAHDGHWLGRGAWSGESQ 60

Query: 61  ITARVWSFE-QEPIDRDFFIKRIEQAQLLRNDIIERDGLTGYRLIAAESDGLPGITIDKY 119
           I  RVW+F+ +E IDR+FF +RI +AQ  R+D+I   GLTGYRLIAAESDGLPGITIDKY
Sbjct: 61  IQVRVWTFDREEEIDREFFKRRILRAQAGRDDLIREQGLTGYRLIAAESDGLPGITIDKY 120

Query: 120 QDYLVCQLLSAGAEYQKQTLVEALLHCFPECHIYERSDVAVRKKEGLDERVGVLHGELPP 179
            + LVCQLLS GA+  + T+V+ L   +P+C IYERSDV  RKKEGL   +G+LHG LP 
Sbjct: 121 ANVLVCQLLSMGADVWRDTIVDVLAELYPDCAIYERSDVDSRKKEGLASTMGLLHGTLPE 180

Query: 180 KSVVIEENGVKISVDIVGGHKTGFYLDQRDSRFQSMKYVKEKEVLNCFSYTGGFGLYALK 239
             ++IEENG+KI+VD+  GHKTGFYLDQRD+R  + ++VK K VLNCF YTG FGLYA K
Sbjct: 181 MPLIIEENGIKIAVDVTKGHKTGFYLDQRDNRAIAARFVKGKSVLNCFCYTGTFGLYAAK 240

Query: 240 GGAKRVINADVSQPALDTAKFNAELNGFDISKKRAVFLNADVFKLLREYRDQGTRFDVVV 299
            GA  + N DVS  ALDTA+ N  +NG  +S     +  ADVFKLLR+YRD+G  FDV+V
Sbjct: 241 AGAASIENVDVSSLALDTARLNMRVNG--LSDDNVHYNEADVFKLLRQYRDEGKTFDVIV 298

Query: 300 MDPPKFAESKAQLDGACRGYKDINMLAMQILNPGGTLLTYSCSGLMDQVLFQKIIADAAL 359
           +DPPKFA++K+QL+GACRGYKDINM+A+Q+LNPGG LLT+SCSGLM   LFQKI+ADAAL
Sbjct: 299 LDPPKFADNKSQLNGACRGYKDINMIALQLLNPGGVLLTFSCSGLMPADLFQKIVADAAL 358

Query: 360 DAGRDVKFVERFEQAADHPTDTAYPEGFYLKGFACKV 396
           DA R+++F+ER  QA+DHP  +A+PEGFYLKG   +V
Sbjct: 359 DAKREIQFIERLSQASDHPIGSAFPEGFYLKGLVARV 395