Pairwise Alignments

Query, 397 a.a., ribosomal RNA large subunit methyltransferase I from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., 23S rRNA (cytosine(1962)-C(5))-methyltransferase from Klebsiella michiganensis M5al

 Score =  513 bits (1322), Expect = e-150
 Identities = 249/396 (62%), Positives = 309/396 (78%), Gaps = 3/396 (0%)

Query: 3   PAIYLVKGRDKSLRRKHPWVFSRGISKVEGTPKLGETVDVYSFEGKWLAKAAYSPHSQIT 62
           P + L KGR+KSL R+HPW+FS  ++++EG  + GET+D+   +GKWLA+ AYSP SQI 
Sbjct: 7   PRLVLTKGREKSLLRRHPWIFSGAVARMEGKARSGETIDIVDSQGKWLARGAYSPSSQIR 66

Query: 63  ARVWSFEQ-EPIDRDFFIKRIEQAQLLRNDIIERDGLTGYRLIAAESDGLPGITIDKYQD 121
           ARVWSF++ E ID  FF +R++QAQ  R  +  RDGL  YRLIA ESDGLPG+TID++ D
Sbjct: 67  ARVWSFDRDEAIDNAFFERRLQQAQTWREWLAARDGLDSYRLIAGESDGLPGVTIDRFGD 126

Query: 122 YLVCQLLSAGAEYQKQTLVEALLHCFPECHIYERSDVAVRKKEGLDERVGVLHGELPPKS 181
           + V QLLSAGAEYQ+  +V AL   FP C IY+RSDVAVRKKEGL+   G + GELPP  
Sbjct: 127 FFVLQLLSAGAEYQRAAIVSALQTLFPNCAIYDRSDVAVRKKEGLELAQGPVVGELPPAL 186

Query: 182 VVIEENGVKISVDIVGGHKTGFYLDQRDSRFQSMKYVKEKEVLNCFSYTGGFGLYALKGG 241
           + I E+G+++ VDI GGHKTG+YLDQRDSR  + +YV +K VLNCFSYTGGF + AL GG
Sbjct: 187 LPITEHGMQLLVDIQGGHKTGYYLDQRDSRLATRRYVADKRVLNCFSYTGGFAISALMGG 246

Query: 242 AKRVINADVSQPALDTAKFNAELNGFDISKKRAVFLNADVFKLLREYRDQGTRFDVVVMD 301
            ++V++ D SQ ALD A+ N ELN  D+SK  A F+  DVFKLLR+YRD G +FDV+VMD
Sbjct: 247 CRQVVSVDTSQEALDVARQNVELNKLDLSK--AEFIRDDVFKLLRKYRDAGEKFDVIVMD 304

Query: 302 PPKFAESKAQLDGACRGYKDINMLAMQILNPGGTLLTYSCSGLMDQVLFQKIIADAALDA 361
           PPKF E+K+QL GACRGYKDINMLA+Q+LNPGG LLT+SCSGLM   LFQKI+ADAALDA
Sbjct: 305 PPKFVENKSQLMGACRGYKDINMLAIQLLNPGGILLTFSCSGLMTTDLFQKIVADAALDA 364

Query: 362 GRDVKFVERFEQAADHPTDTAYPEGFYLKGFACKVL 397
           GRDV+F+E+F QAADHP    YPEG YLKGFAC+++
Sbjct: 365 GRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRIM 400