Pairwise Alignments

Query, 397 a.a., ribosomal RNA large subunit methyltransferase I from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  205 bits (522), Expect = 2e-57
 Identities = 137/404 (33%), Positives = 204/404 (50%), Gaps = 17/404 (4%)

Query: 1   MTPAI---YLVKGRDKSLRRKHPWVFSRGISKVEGTPKL----GETVDVYSFEGKWLAKA 53
           MTP +    L +G D+ LR  H WVFS  +  V  TP      GE   V    G+ L  A
Sbjct: 1   MTPELKKLQLRRGEDRRLRVGHLWVFSNEVD-VARTPLKDFAPGEAACVVDAGGRPLGTA 59

Query: 54  AYSPHSQITARVWSFEQE-PIDRDFFIKRIEQAQLLRNDIIERDGLTGYRLIAAESDGLP 112
             +P S I AR+ S + + P+  D   +R+  A  LR  +I   G+  YRL   E D LP
Sbjct: 60  YVNPASLICARMVSRKPDAPLGPDLLRRRLTDALALRERLI---GVPFYRLCFGEGDFLP 116

Query: 113 GITIDKYQDYLVCQLLSAGAEYQKQTLVEALLHCFPECHIYERSDVAVRKKEGLDERVGV 172
           G+ +D+Y D    Q+ +AG E  +  +   L        +  R+D A R+ EGL   V  
Sbjct: 117 GLVVDRYGDVAAAQITTAGMEMHRDDIASVLQDMLSLSALLWRNDTASRELEGLPRVVET 176

Query: 173 LHGELPPKSVVIEENGVKISVDIVGGHKTGFYLDQRDSRFQSMKYVKEKEVLNCFSYTGG 232
             G +P ++V +EE+G + +  +  G KTG++ DQR +R ++ ++ +   VL+ F Y G 
Sbjct: 177 AFGAVP-ETVTVEESGARFTAPLASGQKTGWFYDQRCNRIEAARFAQGARVLDAFCYLGS 235

Query: 233 FGLYALKGGAKRVINADVSQPALDTAKFNAELNGFDISKKRAVFLNADVFKLLREYRDQG 292
           FG+ A + GA  V   D S+PALD A  NA  N     +  AV  + D    L   RD+G
Sbjct: 236 FGVMAARAGAVAVTFLDASRPALDAALANAAANA--TCETDAV--HGDALDTLATLRDEG 291

Query: 293 TRFDVVVMDPPKFAESKAQLDGACRGYKDINMLAMQILNPGGTLLTYSCSGLMDQVLFQK 352
            RF+VV +DPP F + +  +      Y+ +N LA+ ++  GG L+T SCS  +D+   ++
Sbjct: 292 RRFEVVCIDPPAFIKRRKDVKQGLAAYQRVNELAIDLVADGGVLVTCSCSQHLDRDALRR 351

Query: 353 IIADAALDAGRDVKFVERFEQAADHPTDTAYPEGFYLKGFACKV 396
           ++  AA       + V +  Q  DHP   A PE  YLK F  +V
Sbjct: 352 VLLHAAGRRRTQAQIVFQGHQGPDHPVHPAMPETDYLKCFIARV 395