Pairwise Alignments

Query, 976 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Pseudomonas fluorescens FW300-N2E2

 Score =  115 bits (288), Expect = 4e-30
 Identities = 69/187 (36%), Positives = 105/187 (56%), Gaps = 2/187 (1%)

Query: 783 LYLVEQVALQTQKLRLQAEKFERLSKEDDLTGLANRRAFDMYLKQAFSRLQNPDQQVSIA 842
           +Y V  VA    +L+    + + LS  D LTGL NR  ++  LK A++R Q     +S+ 
Sbjct: 131 IYDVTDVATNRHQLQAANAQLQLLSSTDRLTGLYNRGHWESDLKAAYARHQRYGHALSLV 190

Query: 843 LLDIDHFKQINDRYSHIIGDQAIVAVSQELLGYVGDKTRVARWGGEEF-TILYVGDPKQA 901
           +LDIDHFK++ND Y H  GD+ I  V++ L  +  D   V R+GGEEF  +L   D   A
Sbjct: 191 MLDIDHFKRVNDTYGHQAGDKVIEQVARLLREHARDSDVVGRYGGEEFGVVLSDTDSSGA 250

Query: 902 WGYFEKLRCKIEQVDLSAVAPGLNVTVSIGFAD-AQQAESYETVLKLADHALLTAKKLGR 960
             + E++R  +E +++      +  T+S+G AD +Q +  +  ++  AD AL T+KK GR
Sbjct: 251 HAFAERMRHSVEALEVLYNDQTIRFTISLGVADLSQPSNDHADLIARADQALYTSKKTGR 310

Query: 961 NRVVKSE 967
           NRV   E
Sbjct: 311 NRVTVHE 317