Pairwise Alignments

Query, 976 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  106 bits (264), Expect = 3e-27
 Identities = 66/171 (38%), Positives = 91/171 (53%), Gaps = 1/171 (0%)

Query: 795 KLRLQAEKFERLSKEDDLTGLANRRAFDMYLKQAFSRLQNPDQQVSIALLDIDHFKQIND 854
           +L+L  E+ ER SK D LTGLANRR  +  L  A ++       + + + DID FK IND
Sbjct: 140 QLQLLLEENERQSKTDLLTGLANRRQIEDVLAAAMAKSDRTQSSLCVVMCDIDFFKNIND 199

Query: 855 RYSHIIGDQAIVAVSQELLGYVGDKTRVARWGGEEFTI-LYVGDPKQAWGYFEKLRCKIE 913
            + H+ GD  +  V+ +L       T +ARWGGEEF I L    P+ A    E+LR  I 
Sbjct: 200 NFGHLCGDDVLKIVASQLQHSAQAATCIARWGGEEFLIVLEHVVPESAGVLCEQLRGLIA 259

Query: 914 QVDLSAVAPGLNVTVSIGFADAQQAESYETVLKLADHALLTAKKLGRNRVV 964
             D  +    + +T+S G    Q  ES +++L   D AL  AK  GRN+VV
Sbjct: 260 ATDYQSYGQHMQLTMSFGCVQYQANESLQSLLCRVDKALYQAKNGGRNQVV 310