Pairwise Alignments

Query, 976 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., diguanylate cyclase with GAF sensor (RefSeq) from Shewanella sp. ANA-3

 Score =  101 bits (251), Expect = 9e-26
 Identities = 66/189 (34%), Positives = 99/189 (52%), Gaps = 8/189 (4%)

Query: 778 LKRRELYLVEQVALQT---QKLRLQAEKFERLSKEDDLTGLANRRAFDMYLKQAFSRLQN 834
           L +R++  ++ ++ Q     +L+   E+    S  D LTG+ NRRAFD+  +  F+R Q 
Sbjct: 134 LNQRQISSLQALSRQVIAILELKKVGEQLHNTSMTDALTGVNNRRAFDLKFEAEFARWQR 193

Query: 835 PDQQVSIALLDIDHFKQINDRYSHIIGDQAIVAVSQELLGYVGDKTRVARWGGEEFTILY 894
             Q   +AL+DIDHFK  ND Y H  GD+A+  V+     +  +    AR+GGEEF ++ 
Sbjct: 194 TGQSFVLALIDIDHFKSFNDSYGHAAGDEALSQVAALFQRHSRNYDFFARYGGEEFVLIL 253

Query: 895 VG-DPKQAWGYFEKLRCKIEQVDLSAVAPGLNVTVSIGFADAQQAESYETVLKLADHALL 953
            G D   A    EKLR  +   +         +TVSIG A A   +  + +L++AD  L 
Sbjct: 254 PGTDTASANKTLEKLRLVVANHEWLL----RQLTVSIGLASADLFDDKKQLLEVADQMLY 309

Query: 954 TAKKLGRNR 962
            AK  GRN+
Sbjct: 310 KAKTQGRNQ 318