Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 773 a.a., sensor histidine kinase/response regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  285 bits (728), Expect = 1e-80
 Identities = 196/522 (37%), Positives = 281/522 (53%), Gaps = 35/522 (6%)

Query: 588  EMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTR 647
            +  +EL  A+  A  M++A+  FLANMSHEIRTP+N +LGM  L+L+ PL   Q++ ++ 
Sbjct: 273  QSNEELEVARRTALDMAEARSAFLANMSHEIRTPLNGLLGMIALSLDGPLTAEQQQQLSI 332

Query: 648  INESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMD 707
             ++S K L+ ++NDILD SK +AG+L +ERI F+L  ++++   ++S  A    +E    
Sbjct: 333  AHDSGKVLVELLNDILDLSKFDAGQLELERIPFDLGSLVEDTANLLSQNA-APSVELACL 391

Query: 708  IDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLRFAVKDTG 767
            I P  P  ++GDP R+ Q++ NL  NA+KFT  G + +     +L+  +  +R  V DTG
Sbjct: 392  IKPQFPAQVLGDPTRVRQIVSNLLSNALKFTRFGRVDV-----KLSHYEGGVRIEVCDTG 446

Query: 768  IGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTF- 826
            IGI Q+    +   F+QA   ITRQ+GGTGLGL+++  L E M G++T+ SE G GS F 
Sbjct: 447  IGIPQEAQARILQPFTQAGAGITRQFGGTGLGLALTYNLCEAMQGRLTISSEAGFGSQFC 506

Query: 827  -EFSVVCGLQDAKMRDISQPVHGLADKRVLVVDDNDSARHILDSLLTAMRFNVV--TVSN 883
             +  + C L        + PV  L    V +   +     +L  LL     + V  ++ +
Sbjct: 507  ADLPLPCHLP-------ATPVEPLRGNVVAITASSSGLAELLGMLLPGWGLDYVQRSIDD 559

Query: 884  GFEALSEIQQKPFDMLFVDWNMPGMNGIELLTRVKTLGLRGHMKSFLVTAYGREINLDGE 943
            G   L     KP DML  D         E L  ++           LVTAYG    +  E
Sbjct: 560  GLLGL-----KP-DMLITDCP-------ECLFNLRP---TFDAPILLVTAYGS--FMPSE 601

Query: 944  NSKLVDALIVKPVNPSNLLDAIVTSYGIEHVRHKTNEAHHNSRPNFAGQSLLLVEDNEVN 1003
             +  +  LI +    + L    +    ++      ++A   +        +LLVEDN VN
Sbjct: 602  EAAALAPLIQQARPLARLALYQILRRAMQSEATVIDDAQIETLAPSRRGRVLLVEDNPVN 661

Query: 1004 QEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITATEHIRANPRW 1063
            Q VA G+L   G  V VA HG EAL +LE   FDLVLMD  MPVMDG  A+  IR + RW
Sbjct: 662  QLVAKGMLVKLGCEVTVAAHGAEALSQLEQRVFDLVLMDCNMPVMDGYEASRQIRQSGRW 721

Query: 1064 HSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVL 1105
              LPIVA+TANAM  + ERC  AGMND+LSKP   ++   VL
Sbjct: 722  SDLPIVALTANAMPEERERCRAAGMNDYLSKPFRREELAAVL 763