Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 948 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

 Score =  274 bits (700), Expect = 3e-77
 Identities = 175/560 (31%), Positives = 302/560 (53%), Gaps = 25/560 (4%)

Query: 578  GILLD--MTERKEMEDELRKAKEAADAMSQA----KGDFLANMSHEIRTPMNAILGMAHL 631
            G+LL   + ER+       + +  A+A++ A    K DFL+ +SHE+RTPMN +LGM+ L
Sbjct: 391  GLLLSFALLERQRQLQSDSRTQYTAEAVTSAELKTKADFLSKISHELRTPMNGVLGMSEL 450

Query: 632  ALNTPLDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTA 691
             L T L   QR YV  I+ S   LL +IN+ILD SK+E+G++ ++ + F+ + ++++  +
Sbjct: 451  LLGTSLSAKQRDYVQTIHSSGNELLNLINEILDISKLESGQIELDDVQFDFNALIEDCLS 510

Query: 692  VVSLKAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQ 751
            +   KA+++ +E +  I P +P  + GDP RL Q ++NL  NA K T +GE++L A V  
Sbjct: 511  IFRAKAEQQKVELISFIQPQLPQVVAGDPTRLRQTLLNLLENAFKQTDEGEVLLIAAVDG 570

Query: 752  LNEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMG 811
              +    LR  V+D+G  +   + D L +A   + + +     G  LGL I++QLV+LM 
Sbjct: 571  -PQDNPRLRITVQDSGRPLEPYERDALLNAAVDSHDFLASTRHGGRLGLIIARQLVQLMD 629

Query: 812  GQITVHSEEGKGSTFEFSVVCGLQDAKMR--DISQPVHGLADKRVLVVDDNDSARHILDS 869
            G   + +   +G+T   S+    +       D+  P+ G    R+L+VDDND+ R +L  
Sbjct: 630  GDFGIQTGTTQGNTLWISLPLASEGLAQNNADLDGPLQG---TRLLIVDDNDTCRKVLVQ 686

Query: 870  LLTAMRFNVVTVSNGFEALSEIQQKP-----FDMLFVDWNMPGMNGIELLTRVKTLGLRG 924
              +A    V  V++G EAL+ ++ K      FD++ +D +MPGM G++L +++K      
Sbjct: 687  QCSAWGLEVSAVASGKEALALLRTKAHLREYFDVVLLDQDMPGMTGMQLASKIKEDSSLN 746

Query: 925  H-MKSFLVTAYGREINLDGENSKLVDALIVKPVN----PSNLLDAIVTSYGIEHVRHKTN 979
            H +   ++T  G   +     +  +  ++ KPV      + L D +        +R    
Sbjct: 747  HDILLIMLTGMGSAPSKIIARNAGIKRILAKPVAGYTLKTTLADELAQRLQSSQLRPALA 806

Query: 980  EAHHNSRPNFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLV 1039
                      +   +L+ EDN ++ +V  G+L    L    A +G+EALE ++   +DLV
Sbjct: 807  SPPLAPLEVPSDFRILVAEDNNISTKVIRGMLNKLNLQPDTACNGEEALEAIKTQPYDLV 866

Query: 1040 LMDMQMPVMDGITATEHIR---ANPRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPI 1096
            LMD +MPV+DG  AT+ +R   A       P+VA+TA+ ++   ER  +AGM+ H++KP+
Sbjct: 867  LMDCEMPVLDGFQATQQLREWEARNGRSRTPVVALTAHILSEHRERAREAGMDGHMAKPV 926

Query: 1097 EVDKFYQVLRHFLQVSDEQS 1116
            E+    +++ H+++V   +S
Sbjct: 927  ELSHLRELIDHWVRVKQAES 946