Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 917 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

 Score =  305 bits (780), Expect = 2e-86
 Identities = 230/695 (33%), Positives = 351/695 (50%), Gaps = 69/695 (9%)

Query: 581  LDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTT 640
            L+  E + +E +L + KEA +A S+ K +FLANMSHEIRTP+N ILG   L   + L   
Sbjct: 260  LETIEIQNIELDLAR-KEALEA-SRIKSEFLANMSHEIRTPLNGILGFTQLLQKSDLTPR 317

Query: 641  QRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEK 700
            Q+ Y+  I +SA +LLGIIN+ILDFSK+EAGKL ++ I FNL D++++   +++  A  K
Sbjct: 318  QQDYLGTIEKSADSLLGIINEILDFSKIEAGKLVLDSIPFNLRDLIEDTLTILAPAAHTK 377

Query: 701  GIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLR 760
             +E +  +    PL L+GDPLRL QV+ NL  NA+KFT++G I + A V   N  +  LR
Sbjct: 378  QLELVSLVYRDTPLSLVGDPLRLKQVLTNLISNAIKFTNEGTIAVRAMVEDDNADRAQLR 437

Query: 761  FAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEE 820
             +V+DTGIG+    L  LF AFSQADNS++RQ GGTGLGL ISK+L+E MGG+I V S  
Sbjct: 438  ISVQDTGIGLTDQDLRALFQAFSQADNSMSRQPGGTGLGLVISKRLIEQMGGEIGVDSIP 497

Query: 821  GKGSTFEFSVVCGLQDAKMRDISQPVHGLADKRVLVVDDNDSARHILDSLLTAMRFNVVT 880
             +GS F  S+        + D+  P   L  +R+ +++ +  AR  L   L ++   V T
Sbjct: 498  DEGSEFWISLSLPKARDDVEDLPHP--ALQGRRIALLEQHPLARQALQHQLESLGLEVHT 555

Query: 881  VSNGFEALSEIQQKPFDMLFVDWNMPGMNGIEL--------LTRVKTLGLR--------- 923
                 +  + I  +      +D  + G+   E+        L  ++ LG +         
Sbjct: 556  FDTLDQMQAAIGAQRQSSQLIDLAVLGVTAREIQPEALSRRLMEIEALGCKCVVLCPTTE 615

Query: 924  -GHMKSFLVTAYGREINLDGEN--SKLVDALIVKPVNPSNLLDAIVTSYGIEHVRHKTNE 980
             GH    L   +     L G+   ++ +  ++V+ V P+    A V              
Sbjct: 616  QGHYHDTLPEVHS-YTQLQGKPACTRKLQRVLVELVRPNQTYAAPVA------------- 661

Query: 981  AHHNSRPNFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVL 1040
                + P+ A + +L V+DN  N  +   LL D G  VV  ++G  AL+ ++   FDLVL
Sbjct: 662  ----AAPSRAAR-VLCVDDNPANLLLVKTLLGDMGAEVVAVDNGPAALDAVKQHSFDLVL 716

Query: 1041 MDMQMPVMDGITATEHIRANPRWH------SLPIVAMTANAMAIDIERCLQAGMNDHLSK 1094
            MD+QMP MDG   TE IR    W        LPI+A+TA+A+A +    LQ+GM+D+L+K
Sbjct: 717  MDVQMPGMDGRQTTEAIR---HWEHTSGSTPLPIIALTAHALANEKRSLLQSGMDDYLTK 773

Query: 1095 PIEVDKFYQVLRHFLQVSDEQSFSSHSPNKPSASKPAMNALLDLPQLTGVDLEQAIFRIG 1154
            PI   +  QV+  +  +           ++P  S+P+    L L  L   D E+ +    
Sbjct: 774  PISDRQLAQVVLKWTGLV--------LRSQPQHSEPSSQPELSLKVL---DKEEGLRLAA 822

Query: 1155 GNQQRYFEILRHFIDSQVDELNSVTGLIEAQDWSSATRVAHTLKGSAANLGLEALAQLAA 1214
            G      ++L   + S   +  ++    ++ D  +     H L G+    G+  L     
Sbjct: 823  GKADLADDMLGMLLQSLEGDRRTIREARQSGDRQALIERVHRLHGATRYCGVPQLRNACQ 882

Query: 1215 EMEQSLEQQVLPSFELLQQAQSLL------TQVDD 1243
            + E  L+Q    S   L +  + +       QVDD
Sbjct: 883  QSETLLKQNHPDSETALDELDAAIDRLEQVVQVDD 917