Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1044 a.a., Sensory box histidine kinase/response regulator from Acidovorax sp. GW101-3H11

 Score =  501 bits (1291), Expect = e-145
 Identities = 299/705 (42%), Positives = 422/705 (59%), Gaps = 29/705 (4%)

Query: 568  DRADKVNGIVGILLDMTER-KEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAIL 626
            +R D    ++G L  M E  + +   LR A   A+  +  K +F+ANMSHEIRTPMNA++
Sbjct: 258  ERTDS-GSVMGRLAAMRENLQRVTLALRDATLQAEQAALVKSEFMANMSHEIRTPMNAVI 316

Query: 627  GMAHLALNTPLDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVL 686
            GM+HLAL T L   QR Y+ +I  S ++LLG+IND+LDFSK+EAGK+ VE I+F LD +L
Sbjct: 317  GMSHLALKTDLTPRQRDYLEKIQRSGQHLLGVINDVLDFSKIEAGKMTVEHIEFELDALL 376

Query: 687  DNVTAVVSLKAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLS 746
            +N+  ++  +A +KG+E + D+ P +PL L+GDPLRLGQV++N   NA+KFT +GE+ + 
Sbjct: 377  NNLAGLLGQRASDKGLEMIYDVAPDVPLWLVGDPLRLGQVLINYTNNAIKFTERGEVCVM 436

Query: 747  ARVSQLNEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQL 806
             RV   ++QQV LRF V+DTG+G+A ++ + +F +F QAD+S TRQ+GGTGLGL+I+++L
Sbjct: 437  VRVEARSDQQVRLRFLVRDTGVGLASEQQERMFRSFEQADSSTTRQFGGTGLGLAITRKL 496

Query: 807  VELMGGQITVHSEEGKGSTFEFSVVCGLQDAKMRDISQPVHG-LADKRVLVVDDNDSARH 865
            VELMGG++ V S  G GSTF  +V  G+  A  +    P H  L  +RVLVVDDN+SAR 
Sbjct: 497  VELMGGEVGVESAPGVGSTFWATVDLGV--AASQRPQPPQHADLLGRRVLVVDDNESART 554

Query: 866  ILDSLLTAMRFNVVTVSNGFEAL-----SEIQQKPFDMLFVDWNMPGMNGIELLTRVKTL 920
            +L  +L  M F+   V++G  AL     ++ + + FD+  VDW MPG++G++ L R++ L
Sbjct: 555  VLLHMLEQMGFDAEAVASGAAALAAAVEADHRHQAFDVALVDWQMPGLDGLQTLERMQGL 614

Query: 921  GLRGHMKSFLVTAYGREINLDGENSKL--VDALIVKPVNPSNLLDAIVTSYGIEHVRHKT 978
            GLR   +  LVTA+GRE  L   +  L  +D L+ KPV  S L D ++     + +   T
Sbjct: 615  GLRKQPRGVLVTAHGREEWLQQGHHALGKLDVLL-KPVGASLLFDTLLRLLADQPLPGDT 673

Query: 979  NE----------AHHNSRPNFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEAL 1028
             E            H       G+ +LLVEDN +NQ+V   LL +TGL V VA +G+  +
Sbjct: 674  REPVDGTPALRDVPHGVPTGLQGRRVLLVEDNPLNQQVGAELLAETGLAVDVAGNGRVGV 733

Query: 1029 ERLEHADFDLVLMDMQMPVMDGITATEHIRANPRWHSLPIVAMTANAMAIDIERCLQAGM 1088
            E  +   +DLVLMDMQMP MDG+ AT  +RA P   SLPIVAMTANA+A D  RC  AGM
Sbjct: 734  EMAQRQHYDLVLMDMQMPEMDGLEATRCLRALPALASLPIVAMTANALAEDRARCQAAGM 793

Query: 1089 NDHLSKPIEVDKFYQVLRHFLQVSDEQSFSSHSPNKPSASKPAMN---ALLDLPQLTGVD 1145
            +D ++KPIE    ++VLR FL  +D+      +P    A  P       L  L  +  +D
Sbjct: 794  DDFVAKPIEPASLWRVLRRFLVPADDGPADGSAPALGEAPPPDAQYQAVLQQLQTIPDLD 853

Query: 1146 LEQAIFRIGGNQQRYFEILRHFIDSQVDELNSVTGLIEAQDWSSATRVAHTLKGSAANLG 1205
                + R      RY   LR F  SQ      +   +   DW  A R+AHTLKG AA++G
Sbjct: 854  TRGGLRRAMDRPARYIATLREFAASQAGTAEQLADALRGGDWPLAERLAHTLKGLAAHIG 913

Query: 1206 LEALAQLAAEMEQSLEQQVL---PSFELLQQAQSLLTQVDDELSA 1247
              AL   A  +EQS  Q+        +L ++ QSL+  +   L A
Sbjct: 914  AGALRSHADTVEQSARQERAHWSSHEQLARELQSLVAHLQAVLPA 958