Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1560 a.a., Multi-sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  444 bits (1143), Expect = e-128
 Identities = 296/849 (34%), Positives = 456/849 (53%), Gaps = 53/849 (6%)

Query: 438  HWLSQMLD---------DLSVAIQLSQNAEQQRLAERKVLEQSQLNQEILDATPNPMYCL 488
            +WL  +L          D  VA+++     ++  AER     + L   +  A    +   
Sbjct: 704  YWLDSVLTPFFGEDGSIDRYVALRIDITDRKKAEAERN-RSNTLLRSVLASAREFSIIAT 762

Query: 489  SADGKFLTVNAKFLDLMGLYNNEVIDKEPQEIFPA--EVAERFAAAHQVL---------- 536
              DG     N+    L+G    E++ K+   +     +VAER  +               
Sbjct: 763  DPDGVITIFNSGAEKLLGYSAEEMVGKQTPALIHLADQVAERGRSLSDEFGVPIEGFRVF 822

Query: 537  ---TQQQSSQNYEVSLVDYTGVQREMLVYEASFSDRADKVNGIVGILLDMTERKEMEDEL 593
               +++   +  E + V   G   E+L+   +  +   ++ G +G+  D++ RKE E  L
Sbjct: 823  VHRSERDGVEAQEWTYVRKDGGHLEVLLVVTAIREDDGRIAGYLGVAQDVSRRKEFERAL 882

Query: 594  RKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINESAK 653
              AK+AA+  S  KG FLANMSHEIRTPMNAILGM  L   T L   Q  YV + + +A 
Sbjct: 883  VLAKQAAEEASVVKGQFLANMSHEIRTPMNAILGMLTLVQRTALTPHQADYVCKAHSAAG 942

Query: 654  NLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIP 713
            +LLG++NDILDFSK+EAGKL++E   F L+ VL ++  V+S    +KG+E L DI PH+P
Sbjct: 943  SLLGLLNDILDFSKIEAGKLHLEPHPFRLETVLRDLAVVLSGSYGDKGVEVLFDIAPHLP 1002

Query: 714  LGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLRFAVKDTGIGIAQD 773
               IGD LRL QV++NL GNA+KFT QG++++S  V    + ++T+R AV DTGIGIA D
Sbjct: 1003 DSFIGDDLRLRQVLLNLAGNALKFTDQGQVIVSVGVLAREDDRLTMRMAVSDTGIGIAAD 1062

Query: 774  KLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSVVCG 833
            +L  +F AF QA+ S TR++GG+GLGL+I++ LVE MGG + V S+ G+GS F F +   
Sbjct: 1063 QLASIFGAFEQAETSTTRRFGGSGLGLTITRHLVERMGGVLRVESQPGRGSRFWFDITLP 1122

Query: 834  L--QDAKMRDISQPVHGLADKRVLVVDDNDSARHILDSLLTAMRFNVVTVSNGFEALSEI 891
            +  + ++  +  +P+      RVLVV+DN  A  IL   +  + ++   V    E  + I
Sbjct: 1123 VSGEGSESAESGRPL------RVLVVEDNPVAGGILAQTVQGLGYDCDLVQESAETKARI 1176

Query: 892  -----QQKPFDMLFVDWNMPGMNGIELLTRVKTLGLRGHMKS-FLVTAYGREINLDGENS 945
                   +P+D + +DW MP ++G+     ++ +G+    +S  +VTAYGR++    E +
Sbjct: 1177 VAADAAGRPYDAVLLDWRMPEVDGLTTARILREMGVTLCPQSIIMVTAYGRDVLSLAEQT 1236

Query: 946  --KLVDALIVKPVNPSNLLDAIVTSYGIEHVRHKTNEAHHNSRPNFAGQSLLLVEDNEVN 1003
                 DA++ KPV P  L DA++           T  A        AG+ LL+VEDN +N
Sbjct: 1237 GDAPFDAVLTKPVTPGQLRDALLRRDRATSEGEATALAPRGLPTPLAGRRLLVVEDNAIN 1296

Query: 1004 QEVALGLLQDTGLNVVVANHGQEALERLEHAD--FDLVLMDMQMPVMDGITATEHIRANP 1061
            ++VA  LL   G  + +A  G+  +  +   +  +D VLMD+QMP +DG  AT  IRA+ 
Sbjct: 1297 RQVAAELLAGAGAEIDLAEGGERGVMMVLRGEIAYDAVLMDIQMPDIDGFEATRRIRADA 1356

Query: 1062 RWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFLQ--VSDEQSFSS 1119
            R+ +LPIVAMTANA   D E CL AGM +H+ KPI++     VL   +   +++ +  + 
Sbjct: 1357 RFKALPIVAMTANASRADREACLAAGMTEHVGKPIDITATIDVLVSLMTEGMTEGEPIAP 1416

Query: 1120 HSPNKPSASK-PAMNALLDLPQLTGVDLEQAIFRIGGNQQRYFEILRHFIDSQVDELNSV 1178
             SP   +  + P+   LL+       DL+    R+GG       +L  F +   + L+ +
Sbjct: 1417 PSPMGGTGREVPSDEPLLE-------DLDSIAERLGGQVDLLRRLLPTFAERTGELLDEI 1469

Query: 1179 TGLIEAQDWSSATRVAHTLKGSAANLGLEALAQLAAEMEQSLEQQVLPSFELLQQAQSLL 1238
              LI   DWS+ +   HT+KGSAA++G  ALA  AA  E+ L +    + + L++ Q+L 
Sbjct: 1470 EDLIGRGDWSALSMAFHTIKGSAASMGAVALASHAALWEERLREDGPGTLDALRRDQALC 1529

Query: 1239 TQVDDELSA 1247
             Q+   L+A
Sbjct: 1530 DQMRALLAA 1538