Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 811 a.a., Hpt Sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  251 bits (640), Expect = 2e-70
 Identities = 156/418 (37%), Positives = 247/418 (59%), Gaps = 24/418 (5%)

Query: 557 REMLVYEASFSDRADKVNGIVGILLDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSH 616
           R+  V   +  D +++ +G V I  D+T  K       +A + A+  +QAK  FLA MSH
Sbjct: 255 RDFEVRRQAMLDVSERYSGQVLIFSDITAYK-------RASDRAEEANQAKSTFLATMSH 307

Query: 617 EIRTPMNAILGMAHLALNTPLDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVE 676
           EIRTP+N ILG++ L  +   D   R +   I  SA+ LL ++ND+LDF+K+EAG L+++
Sbjct: 308 EIRTPINGILGLSTLMRDELRDERLRHHADAIALSAEMLLSMVNDVLDFTKIEAGILDLD 367

Query: 677 RIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVK 736
            +DF+++++L+ V A+V+  A  KG+E    + P +P  L GD  +L QV++NL  NAVK
Sbjct: 368 PVDFSVEELLNGVFALVAPSAHRKGLEVYRSVSPAVPERLHGDLAKLRQVLLNLFSNAVK 427

Query: 737 FTSQGEIVLSA-RVSQLNEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGG 795
           FT  G + +   R+++  E +V L   V DTGIGIA   L  +F+ F+QAD SI+R++GG
Sbjct: 428 FTHAGALSIHIDRLAEAPEGKVILHITVDDTGIGIAPSALKAIFEPFAQADGSISRRFGG 487

Query: 796 TGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSVVCGLQDAKM------RDISQPVHGL 849
           TG+GL+I+++L E+MGG++   S EG+GS F  + +  L+ A++          QP   L
Sbjct: 488 TGMGLAINRRLAEVMGGEVWAESREGEGSRFHVTAL--LEAARLPPPPPDTANGQPPAFL 545

Query: 850 ADK--RVLVVDDNDSARHILDSLLTAMRFNVVTVSNGFEALSEIQQKPFDMLFVDWNMPG 907
           AD+   VLVVDDND    + +  L     +VV   NG EA + ++ + FD   +D N+P 
Sbjct: 546 ADRPLSVLVVDDNDVNLMVAEGFLKRFGHDVVLARNGREARALLEHRRFDAALLDINLPD 605

Query: 908 MNGIELLTRVK----TLGLRGHMKSFLVTAYGREINLDGENSKLVDALIVKPVNPSNL 961
            NG++LL  V+     +GLR  M   +++A+  + ++   +++L    + KP NP  L
Sbjct: 606 ANGLDLLAEVRRHEAAVGLRS-MPIIVLSAHVMQADI-ARSARLDVRFLGKPFNPERL 661



 Score = 96.3 bits (238), Expect = 1e-23
 Identities = 73/233 (31%), Positives = 114/233 (48%), Gaps = 10/233 (4%)

Query: 993  SLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGIT 1052
            S+L+V+DN+VN  VA G L+  G +VV+A +G+EA   LEH  FD  L+D+ +P  +G+ 
Sbjct: 551  SVLVVDDNDVNLMVAEGFLKRFGHDVVLARNGREARALLEHRRFDAALLDINLPDANGLD 610

Query: 1053 ATEHIR---ANPRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFL 1109
                +R   A     S+PI+ ++A+ M  DI R  +  +   L KP   ++  ++LR   
Sbjct: 611  LLAEVRRHEAAVGLRSMPIIVLSAHVMQADIARSARLDVR-FLGKPFNPERLRRMLRDLT 669

Query: 1110 QVSDEQSFSSHSPNKPSASKPAMNALLDLPQLTGVDLEQAIFRIGGNQQRYFEILRHFID 1169
            +  D+          P A       +L  P +    +E       G      +IL  F  
Sbjct: 670  RQDDDPRAGEGDGEGPVAEDFTAGPVLVDPAVLRGHVEMLGATAAG------KILAAFHG 723

Query: 1170 SQVDELNSVTGLIEAQDWSSATRVAHTLKGSAANLGLEALAQLAAEMEQSLEQ 1222
            S    L ++   +EA   + A   AH LK ++ANLGLE L + AAE+E +  Q
Sbjct: 724  SAPRTLATLCSHVEAGRIAEAEDDAHRLKSASANLGLECLRRRAAELEAACGQ 776