Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 759 a.a., putative two-component sensor histidine kinase/response regulator hybrid protein from Phaeobacter inhibens DSM 17395

 Score =  344 bits (883), Expect = 2e-98
 Identities = 226/578 (39%), Positives = 327/578 (56%), Gaps = 30/578 (5%)

Query: 534  QVLTQQQSSQNYEVSLVDYTGVQREMLVYEASFSDRADKVNGIVGILLD-MTERKEMEDE 592
            Q++ Q+ S      ++   +G+Q   L + AS   RA  +N  VG+L D  +ER E E  
Sbjct: 174  QIIHQRMSG-----AIAGLSGLQAR-LPWFASREFRA--LNFSVGVLEDTFSERDEREYA 225

Query: 593  LRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINESA 652
            L +A++AAD  ++AK +FLANMSHEIRTPMN ++GMA L L T LD  Q  Y   I++S 
Sbjct: 226  LEEARKAADIANRAKSEFLANMSHEIRTPMNGVIGMAELILETDLDEDQTMYAETISKSG 285

Query: 653  KNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHI 712
              LL IINDIL+FSK+EAGK+ +ER  FNL   +++V  ++S KA EK +E  +  DP +
Sbjct: 286  SALLTIINDILNFSKIEAGKMELERAPFNLQTAIEDVVTLLSPKAAEKNVEVTLRYDPSL 345

Query: 713  PLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLRFAVKDTGIGIAQ 772
            P    GD  R+ Q++ N+ GNAVKFT +G + +     + ++ +  LR +V DTG GI +
Sbjct: 346  PECYEGDVGRIRQILTNVAGNAVKFTGKGYVYIEVS-GETDDDRTALRISVTDTGAGIPE 404

Query: 773  DKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSVVC 832
            D+LD +F+AF QAD + TR Y GTGLGL+IS +L+ELMGG+I+V SE GKGS F   +  
Sbjct: 405  DRLDRIFNAFEQADGAATRNYEGTGLGLAISTRLLELMGGRISVQSELGKGSVFAIDLPL 464

Query: 833  GLQDAKMRDISQPVHGLADKRVLVVDDNDSARHILDSLLTAMRFNVVTVSNGFEAL---- 888
             ++ ++ +  +Q        R LVVDD +  R IL   L       V   +  +AL    
Sbjct: 465  RIRPSQPKR-AQDARDFKGLRALVVDDLELNRIILTERLATWGVQSVAAGSAHQALELLL 523

Query: 889  -SEIQQKPFDMLFVDWNMPGMNGIELLTRVKTLGLRGHMKSFLVTAYGREINLDGENSKL 947
             S      +D++  D+ MPGM+G EL  R++ +     +   ++++    I+ +      
Sbjct: 524  DSRHDGTHYDVILQDFQMPGMDGKELAERIRDIPEYRDLPIVILSSVENTIDREAREHLG 583

Query: 948  VDALIVKPVNPSNLLDAIVTSYGIEHVRHKTNEAHHNSRPNFAGQS------LLLVEDNE 1001
               + +KP+  + L    V S  +E     T EA     P     S      LLL EDN 
Sbjct: 584  RCEVALKPLRAAQLQS--VMSRVLETA---TEEAPQAVPPQGVETSVVPEVKLLLAEDNR 638

Query: 1002 VNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITATEHIRANP 1061
             NQ V   +L+   + V++A +G+EA+   +    D+VLMDM MPV DGI AT  IR   
Sbjct: 639  TNQLVVSRMLKAAPIEVLIAANGEEAVTMFQEHHPDIVLMDMMMPVKDGIDATAEIRQLE 698

Query: 1062 RWHSL---PIVAMTANAMAIDIERCLQAGMNDHLSKPI 1096
            + + L   P+VA+TANA+    E CL AGM+D LSKPI
Sbjct: 699  KDNGLGRCPVVALTANALQSHREECLAAGMDDFLSKPI 736



 Score = 64.7 bits (156), Expect = 3e-14
 Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 5/134 (3%)

Query: 988  NFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERL-----EHADFDLVLMD 1042
            +F G   L+V+D E+N+ +    L   G+  V A    +ALE L     +   +D++L D
Sbjct: 479  DFKGLRALVVDDLELNRIILTERLATWGVQSVAAGSAHQALELLLDSRHDGTHYDVILQD 538

Query: 1043 MQMPVMDGITATEHIRANPRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFY 1102
             QMP MDG    E IR  P +  LPIV +++    ID E     G  +   KP+   +  
Sbjct: 539  FQMPGMDGKELAERIRDIPEYRDLPIVILSSVENTIDREAREHLGRCEVALKPLRAAQLQ 598

Query: 1103 QVLRHFLQVSDEQS 1116
             V+   L+ + E++
Sbjct: 599  SVMSRVLETATEEA 612