Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 754 a.a., signal transduction histidine kinase from Phaeobacter inhibens DSM 17395

 Score =  265 bits (677), Expect = 1e-74
 Identities = 182/565 (32%), Positives = 302/565 (53%), Gaps = 35/565 (6%)

Query: 421 IALLELGTVGMLTMQQYHWLSQML--------DDLSVAIQLSQNAEQQRLAERKVLEQSQ 472
           + L ++  +G+L    + ++S ++        + L++A+Q  Q A+     + + L QSQ
Sbjct: 186 VQLFQIAGLGVLYFSVFFFVSFIVGRYNRSRKNTLAMALQHKQLAQINAKLQAQQL-QSQ 244

Query: 473 LNQEILDATPNPMYCLSADGKFLTVNAKFLDLMGLYNNEVIDKEPQEIFPAE-------- 524
               + +   + ++ +   G+   VN  F  + G   +E I K P  +   +        
Sbjct: 245 RLALVAENANDSVFLMDEKGRISWVNEAFTRITGYRYDEAIGKMPGALLNGDDTDMAVVR 304

Query: 525 VAERFAAAHQVLTQQQSSQNYEVSLVDYTGVQREMLVYEASFSDRADKVNGIVGILLDMT 584
             E+  A  +    +  ++  +  L+     Q  ML  + +       V  I+ +  D+T
Sbjct: 305 ALEKGRATGKPFRLEICNRRKDGQLLWLETNQVPMLRDDGT-------VETIIAVERDVT 357

Query: 585 ERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKY 644
             K+ E +L+ A+ AA+  ++ K +FLA MSHEIRTPMN ++GMA +   T LD  Q+ Y
Sbjct: 358 AAKQYEQQLKDARIAAEEGARVKSEFLATMSHEIRTPMNGVIGMAQMLERTQLDEEQKLY 417

Query: 645 VTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEF 704
              I  SA+ LL +IND+LD SKM+AG++ +  +DF+L         +   +AQEKGI  
Sbjct: 418 ADTILGSARTLLSLINDVLDLSKMDAGEVILSEVDFDLPACFQQTLQLFEPQAQEKGITL 477

Query: 705 LMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLRFAVK 764
            ++I P +P  + GD  RL QV++NL GNAVKFT  G + ++   S++ + ++ LRF+V 
Sbjct: 478 DLNIAPDVPRIINGDDRRLRQVLLNLVGNAVKFTDTGGVGVAVTTSRVGD-RLRLRFSVT 536

Query: 765 DTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGS 824
           DTGIGIA++K D +F+ FSQAD +ITR++GGTGLGL+IS+ L E MGG+I V S+ GKGS
Sbjct: 537 DTGIGIAKEKQDQIFERFSQADAAITRRFGGTGLGLTISRLLCEAMGGEIDVTSDPGKGS 596

Query: 825 TFEFSVVCGLQDAKMRDIS-------QPVHGLADKRVLVVDDNDSARHILDSLLTAMRFN 877
              FSV   +Q A   +++       Q    L   R+LV +DN   R +++  L      
Sbjct: 597 C--FSVHLRMQPATGANLAEVAASAQQAGRSLEGMRILVAEDNRINRLLVEKYLQDEPVT 654

Query: 878 VVTVSNGFEALSEIQQKPFDMLFVDWNMPGMNGIELLTRVKTLGLRGHMKSFLVTAYGRE 937
           +    +G EAL +      D++ +D +MP MNG++    ++ + +R  + + L TA   +
Sbjct: 655 LEFAVDGAEALEKTPDFAPDVILMDMSMPVMNGLDATRNIREMDIRQPVIAAL-TANAFD 713

Query: 938 INLDGENSKLVDALIVKPVNPSNLL 962
            + +      +D  + KP+N  +LL
Sbjct: 714 SDREACLKAGMDDFLSKPINRDDLL 738



 Score = 88.2 bits (217), Expect = 3e-21
 Identities = 65/189 (34%), Positives = 94/189 (49%), Gaps = 18/189 (9%)

Query: 921  GLRGHMKSFLVTAYGREINLD---GENSKLVDALIVKPVNPSNLLDAIVTSYGIEHVRHK 977
            GL   +   L  A G EI++    G+ S     L ++P   +NL +   ++         
Sbjct: 569  GLGLTISRLLCEAMGGEIDVTSDPGKGSCFSVHLRMQPATGANLAEVAASA--------- 619

Query: 978  TNEAHHNSRPNFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFD 1037
                   +  +  G  +L+ EDN +N+ +    LQD  + +  A  G EALE+      D
Sbjct: 620  -----QQAGRSLEGMRILVAEDNRINRLLVEKYLQDEPVTLEFAVDGAEALEKTPDFAPD 674

Query: 1038 LVLMDMQMPVMDGITATEHIRANPRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIE 1097
            ++LMDM MPVM+G+ AT +IR       + I A+TANA   D E CL+AGM+D LSKPI 
Sbjct: 675  VILMDMSMPVMNGLDATRNIREMDIRQPV-IAALTANAFDSDREACLKAGMDDFLSKPIN 733

Query: 1098 VDKFYQVLR 1106
             D    VLR
Sbjct: 734  RDDLLAVLR 742