Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 764 a.a., signal transduction histidine kinase from Phaeobacter inhibens DSM 17395

 Score =  311 bits (798), Expect = 1e-88
 Identities = 214/705 (30%), Positives = 353/705 (50%), Gaps = 57/705 (8%)

Query: 445  DDLSVAIQLSQNAEQQRLAERKVLEQSQLNQEILDATPNPMYCLSADGKFLTVNAKFLDL 504
            ++  V   LS   E+   AER++    Q  Q+             AD K +  N  +LDL
Sbjct: 59   ENAKVKSDLSTANEKVERAERRLWHSIQAFQD-------GFAFFDADSKLIGANTAYLDL 111

Query: 505  MGLYNNEVIDKEPQEIFPAEVAERFAAAHQVLTQQQSSQNYEVSLVDYTGVQREMLVYEA 564
                  + +++    +    + +       V T +Q   ++   + +         V   
Sbjct: 112  F-----DGLEEVTPGVSYVRILQILTDEGLVNTGEQDPDHWRAQMSERWLSPSPEPVVVR 166

Query: 565  SFSDRADKV-------NGIVGILLDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSHE 617
             + DR  ++         +V + LD+T   + E+EL+ A+E A+A ++AK  FLANMSHE
Sbjct: 167  MWDDRYLRLLDQRGHGGDMVSLALDITSTVQYEEELQAARERAEAANRAKSAFLANMSHE 226

Query: 618  IRTPMNAILGMAHLALNTPLDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVER 677
            IRTPMN ++GMA L  +T L   Q+ Y   I  S + LL IIND+LD+SK+EA KL +  
Sbjct: 227  IRTPMNGVVGMAELLSDTNLSDEQQLYANTIKNSGEALLVIINDVLDYSKIEAQKLELHP 286

Query: 678  IDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKF 737
              F+L+  +  V  ++   A++KG+  L+D D  +P   +GDP R+ QV+ NL GNAVKF
Sbjct: 287  EPFDLERSVHEVLMLLQPTARDKGLTLLLDYDLFLPTSFVGDPGRIRQVLTNLVGNAVKF 346

Query: 738  TSQGEIVLS-ARVSQLNEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGT 796
            TS+G + L    +S   ++  ++   ++DTGIGI ++K+ D+F  F+Q ++   RQ+ GT
Sbjct: 347  TSEGHVALQITGISNAGDKICSIHVTIEDTGIGIPEEKVQDIFGEFNQVEDERNRQFEGT 406

Query: 797  GLGLSISKQLVELMGGQITVHSEEGKGSTFEFSVVCGLQDAKMRDISQPVHGLADKRVLV 856
            GLGL+ISK+L+ELMGG+I V S+EGKGS F F +   L +     I     GL   ++ V
Sbjct: 407  GLGLAISKRLIELMGGEIWVESQEGKGSCFGFRMELPLAEGASTSIPTLPKGLC--QIAV 464

Query: 857  VDDNDSARHILDSLLTAMRFNVVTVSNGFEALSEIQQKPFDMLFVDWNMPGMNGIELLTR 916
            +D     R +L   L  +   V    NG  A++ +     D++  D  +P  NG+EL  +
Sbjct: 465  IDSQSVMRDVLSKQLAMLGLEVTVFDNGAAAIAGMPD-GVDLVVCDEQLPDQNGVELAQK 523

Query: 917  VKTLGLRGHMKSFLVTAYGREINLDGENSKLVDALIVKPV-------------------N 957
            +++          L+ +       + +   + D++++KP+                    
Sbjct: 524  LRSGPFA--QVPILMLSSDPTAPSNSDVQSVTDSVLLKPIQRDELFQRLVDLPGGGSATR 581

Query: 958  PSNLLDAIVTSYGIEHVRHKTNEAHHNSRPNFAGQS-----------LLLVEDNEVNQEV 1006
            PS + + +VT   +  V    +       P  A  +           +L  EDN  NQ V
Sbjct: 582  PSAVPETVVTPPELNSVATHPDPPQPAPAPAAALTAVSTCPTQRLMRVLAAEDNRTNQLV 641

Query: 1007 ALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITATEHIRANPRWHSL 1066
               +++D  +++   ++G EA+E  +    DL+ MD+ MPVMDG  AT+ IRA      +
Sbjct: 642  FRKMVKDLNIDLQFVSNGIEAVEVYQSFQPDLIFMDISMPVMDGKEATQKIRALEHGTGI 701

Query: 1067 --PIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFL 1109
              P+VA+TA+AMA D +  L AG++ +L+KP+     ++ +  +L
Sbjct: 702  YTPVVALTAHAMAGDSDGILAAGLDHYLTKPLRKALIHERIHAYL 746