Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1042 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  345 bits (885), Expect = 1e-98
 Identities = 266/833 (31%), Positives = 435/833 (52%), Gaps = 56/833 (6%)

Query: 445  DDLSVAIQLSQNAEQQRLAERKVLEQSQLN-QEILDATPNPMYCLSADGKFLTVNAKFLD 503
            D+  V +     A   R  ++  L++S+     I +  P  +  + A  ++  +N  +L 
Sbjct: 232  DEFGVLVNSYNEAVSARNQKQLELQKSRRYIDNITNVIPIQLAYVDAQSRYRFINQHYLQ 291

Query: 504  LMGLYNNEVIDKEPQEIFPAEVAERFAAAHQVLTQQQSSQNYEVSLVDYTGVQREM-LVY 562
             +G    +V+D+  + + PA+V +      Q +    + Q +E   +D     R   + Y
Sbjct: 292  WLGKTEEDVLDQTVEAVQPADVYQLIKPYQQGVLAG-NKQVFEAETIDADQAPRFFHITY 350

Query: 563  EASFSDRADKVNGIVGILLDMTERK-----------EMEDE---LRKAKEAADAMSQAKG 608
                 D   +V G    + D+T  K           EME     L +A+E A+  ++ K 
Sbjct: 351  VPDVGDDG-QVEGYFICVEDLTRMKLNERKIETYAQEMEFSNWALSEAREKAEVAAKTKE 409

Query: 609  DFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINESAKNLLGIINDILDFSKM 668
            DFLA MSHEIRTPMN ++G+  L   T L   Q++YV   + SA +LL ++NDILDFSK+
Sbjct: 410  DFLACMSHEIRTPMNGVIGILGLLGETQLSPMQKRYVDVASASADSLLSLLNDILDFSKI 469

Query: 669  EAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMV 728
            E+GK  +E I+F+L ++LD     VSLK +E+ +   +DI       ++GDP RL Q++V
Sbjct: 470  ESGKFEIEAIEFDLVELLDLFVQSVSLKLEERHLPLFVDITQLQYRYVVGDPSRLRQILV 529

Query: 729  NLCGNAVKFTSQGEIVL--SARVSQLNEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQAD 786
            NL GNA+KFT +G I L  S R+S+  E  V L   V+DTGIGIA++KL  LF+ F Q D
Sbjct: 530  NLVGNAIKFTEEGWIALRLSNRLSESGE--VLLSCEVEDTGIGIAKEKLAMLFNPFIQVD 587

Query: 787  NSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSVVCGLQDA-KMRDISQP 845
            +S TR +GGTGLGLSI+K+L ELM G+I V S++  GS F F++   L D+ KM D    
Sbjct: 588  SSTTRMFGGTGLGLSIAKRLCELMQGEIKVRSQQEVGSIFSFTLTQQLADSDKMIDWRA- 646

Query: 846  VHGLADKRVLVVDDNDSARHILDSLLTAMRFNVVTVSNGFEALSEIQQKPFDMLFVDWNM 905
              GL+ +RV ++    +   +L  LLT+    V  +    +A+ E      D++   +  
Sbjct: 647  --GLSPERVTLMGQLGAFERMLGELLTSWGARVSYLEEE-DAILET-----DVIIYSFAP 698

Query: 906  PGMNGIELLTRVKTL----GLRGHMKSFLVTAYGREINLDGENSKLVDALIVKPVNPSNL 961
                 +E L   + L      R + +   + +Y ++   + +++++    + +P+N   L
Sbjct: 699  RREAFVEELNAWRELVGQHADRPNTRVLPLLSYWQQTEFEKQDARVPH--LGRPLNIRQL 756

Query: 962  LDAIVTSYGIEHVRHKTNEAHHNSRPNFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVA 1021
            + A+      E +          S P+     +LLVEDN+VNQ VALG+L   G+   VA
Sbjct: 757  IRALSDRADEEMIEPVIEPIVEPSMPD--KPKVLLVEDNKVNQMVALGMLHQLGVQADVA 814

Query: 1022 NHGQEA---LERLEHADFDLVLMDMQMPVMDGITATEHIR---ANPRWHSLPIVAMTANA 1075
            ++G+EA   L  L+   + L+LMD  MP MDG  AT  IR      ++ +LPI+A+TANA
Sbjct: 815  SNGREALALLSALQGNPYQLILMDCLMPEMDGFQATAAIREGQGGSQFCALPIIALTANA 874

Query: 1076 MAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFLQVSDE--QSFSSHSPNKPSASKPAMN 1133
            M  D E C++AGM+D+L+KP+ +    + L  +  +S +  ++   H P+  +   P + 
Sbjct: 875  MKGDREHCIRAGMDDYLTKPLVLSVLKECLYRWFSLSQQNYEAALGHDPDVETLPTP-IE 933

Query: 1134 ALLDLPQLTGVDLEQAIFRIGGNQQRYFEILRHFIDSQVDELNSVTGLIEAQDWSSATRV 1193
            A   L      D + A+  + G++    E+L+ F++   D   +    I A D ++    
Sbjct: 934  AESQL-----FDRDSALALMSGDEALLDEVLQVFVEEMQDHRKAFIEGIAAADCTAIRSS 988

Query: 1194 AHTLKGSAANLGLEALAQLAAEMEQSLEQQVLPSFELLQQAQSLLTQVDDELS 1246
             H +KG+A+NL + AL +LA ++E    +  L +  +L   ++ L  ++D L+
Sbjct: 989  VHAIKGAASNLSMTALVELARQLEADARRGDLQA--VLAGREAFLELLEDTLA 1039