Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1281 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  247 bits (631), Expect = 4e-69
 Identities = 154/390 (39%), Positives = 224/390 (57%), Gaps = 21/390 (5%)

Query: 592  ELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINES 651
            EL +A++ A++ S+AK  FLANMSHEIRTPMNAILG++HL      D   R+ V +I+ +
Sbjct: 806  ELAEARDEAESASRAKSAFLANMSHEIRTPMNAILGLSHLLGREVGDARARERVDKIHGA 865

Query: 652  AKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPH 711
            A +LL IINDILD SK+EA KL+++  DF L  + DN   ++  + + KG+     +DP 
Sbjct: 866  ATHLLNIINDILDLSKIEAEKLHLDMQDFLLARLFDNAENLLRPQLEAKGLRLERHLDPA 925

Query: 712  IPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLRFAVKDTGIGIA 771
            +P  L GD + L Q++VN   NAVKF+ QG I L AR+   ++ QV LR  V D GIGIA
Sbjct: 926  LPPVLRGDAMHLQQILVNFLSNAVKFSDQGHITLGARLLSRSQSQVELRLEVADQGIGIA 985

Query: 772  QDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSVV 831
             ++   LF AF QADNS TR+YGGTGLGL+ISK+L+ LMGG I V S+ G+GS F  S+ 
Sbjct: 986  PEQQAALFQAFEQADNSTTRKYGGTGLGLAISKRLIRLMGGDIGVDSKPGQGSVFWISLR 1045

Query: 832  CGLQD------AKMRDISQPV-----HGLADKRVLVVDDNDSARHILDSLLTAMRFNVVT 880
              + D      A   +   P      HG    R+L+ +DN   + +   LL      V  
Sbjct: 1046 LEVADTAAGTTAATAEQELPARLRARHG--GCRILLAEDNALNQEVAQDLLHDAGLAVSV 1103

Query: 881  VSNGFEALSEIQQKPFDMLFVDWNMPGMNGIELLTRVKTLGLRGHMKSFLVTAYGREINL 940
              +G +A+S  Q   FD++ +D NMP ++G++    ++ L     +    +TA       
Sbjct: 1104 AEDGHQAVSLAQSGGFDLVLMDVNMPHLDGLQATRAIRELPGCADLPILAMTAGA----F 1159

Query: 941  DGENSKLVDA----LIVKPVNPSNLLDAIV 966
              + ++ ++A     + KPV P  L  A++
Sbjct: 1160 AEDRARCLEAGMNDFVAKPVVPEVLYQALL 1189



 Score =  114 bits (286), Expect = 4e-29
 Identities = 62/124 (50%), Positives = 77/124 (62%)

Query: 986  RPNFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQM 1045
            R    G  +LL EDN +NQEVA  LL D GL V VA  G +A+   +   FDLVLMD+ M
Sbjct: 1069 RARHGGCRILLAEDNALNQEVAQDLLHDAGLAVSVAEDGHQAVSLAQSGGFDLVLMDVNM 1128

Query: 1046 PVMDGITATEHIRANPRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVL 1105
            P +DG+ AT  IR  P    LPI+AMTA A A D  RCL+AGMND ++KP+  +  YQ L
Sbjct: 1129 PHLDGLQATRAIRELPGCADLPILAMTAGAFAEDRARCLEAGMNDFVAKPVVPEVLYQAL 1188

Query: 1106 RHFL 1109
              +L
Sbjct: 1189 LRWL 1192