Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 909 a.a., two-component sensor histidine kinase BarA from Pantoea sp. MT58

 Score =  311 bits (797), Expect = 2e-88
 Identities = 210/647 (32%), Positives = 342/647 (52%), Gaps = 42/647 (6%)

Query: 580  LLDMTERKEMED-ELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLD 638
            L +  E+ E+++ EL  AK+ A   ++ K +FLANMSHE+RTP+N +LG     L T L 
Sbjct: 265  LRETLEQLEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVLGFTRQMLKTQLR 324

Query: 639  TTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQ 698
            TTQR Y+  I  SA NLL IIND+LDFSK+EAGKL +E I F L   LD    +++  A 
Sbjct: 325  TTQRDYMQTIERSANNLLSIINDVLDFSKLEAGKLMLEAIPFPLRATLDETLVLLAPSAH 384

Query: 699  EKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVT 758
            +KG+E  +  D  +P  +IGD LRL Q+++NL GNA+KFT +G I L      + + +V 
Sbjct: 385  DKGLELTVVCDSSVPDNVIGDALRLQQILINLIGNAIKFTEKGYIGLRVGQRVITQSRVE 444

Query: 759  LRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHS 818
            L   V+D+GIGI++ +   +F AF QAD SI+R++GGTGLGL I+++LV  MGG+IT  S
Sbjct: 445  LEIQVEDSGIGISEQQQTQMFQAFRQADASISRRHGGTGLGLVITQKLVREMGGEITFSS 504

Query: 819  EEGKGSTFEFSVVCGLQDAKMRDISQPVHGLADKRVLVVDDNDSARHILDSLLTAMRFNV 878
            +  +GS F   V   L +     + + +  L+  R+  V+ +         +L+A    +
Sbjct: 505  QPDQGSVFVIRVQLDL-NPNAPGMPRVLDALSHARIAYVEPDAYVASAALEMLSATPLQI 563

Query: 879  VTVSNGFEALSEIQQKPFDMLF----VDWNMPGMNGIELLTRVKTLGLRGHMKSFLVTAY 934
                +  E L  ++   + +L     VD + P     ELL   +  GL     + L+   
Sbjct: 564  ----DYSETLEGLKAPHYPLLLMAMPVDISQP-----ELLNERRINGLLDRADNVLMALP 614

Query: 935  GREINLDGE-NSKLVDALIVKPVNPSNLLDAIVTSYGIEHVRHKTNEAHHNSRPNFAGQS 993
               + L  E  ++ +D  I KP++ + LL  ++      H R  +        P     +
Sbjct: 615  SPMMLLADELKARGIDGCIAKPISLTRLLPMLLDL----HTRQMSELPPSPRLP----LT 666

Query: 994  LLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITA 1053
            ++ V+DN  N ++   LL++   N+++ +  + A+        D++LMD+QMP +DGI A
Sbjct: 667  VMAVDDNPANLKLIGALLEEQVQNILLCSSAEHAIREARQQPLDVILMDIQMPEIDGIRA 726

Query: 1054 TEHIRANPRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFLQVSD 1113
            +E IR+ P+  S PIVA+TA+A+  + E+ ++AGMND+L+KPI+  K  Q+L  +     
Sbjct: 727  SEIIRSLPQHASTPIVAVTAHAIDGEREQLIKAGMNDYLAKPIDESKLRQLLARYTP--- 783

Query: 1114 EQSFSSHSPNKPSASKPAMNALLDLPQLTGVDLEQAIFRIGGNQQRYFEILRHFIDSQVD 1173
                       P    P +     LP L  +D + A+ +         ++LR  ++   +
Sbjct: 784  ----------PPVVPVPEL-----LPILPTLDWQLALRQAANKPDLARDLLRMLLEFLPE 828

Query: 1174 ELNSVTGLIEAQDWSSATRVAHTLKGSAANLGLEALAQLAAEMEQSL 1220
                +   +   + ++   + H L GSA+  G+  + QL  ++E+ L
Sbjct: 829  VHAKMAQFMATNEVNALREIIHKLHGSASYSGVPRMKQLCHQLERGL 875