Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1141 a.a., response regulator/sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  259 bits (663), Expect = 8e-73
 Identities = 200/671 (29%), Positives = 330/671 (49%), Gaps = 71/671 (10%)

Query: 582  DMTERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQ 641
            ++ +R+ +E+ L  AKE A+  ++ K +FLA MSHEIRTPMN ++GMA     TPL   Q
Sbjct: 537  EINKRRIVENALAIAKENAELATKRKAEFLAAMSHEIRTPMNGLVGMAEQLSFTPLGIEQ 596

Query: 642  RKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKG 701
            ++ V  I+  A+ +L IIN+ILDFSK++ GK+ +E     L +VLD+   +V    + K 
Sbjct: 597  KQMVQIISNGAEEILQIINNILDFSKIDMGKMRLESTPILLREVLDSTLNMVMNDLRTKD 656

Query: 702  IEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLRF 761
            +   + +D  +   + GD LR+ Q++ N   NA+KFT +G I +S ++    E Q  L  
Sbjct: 657  LSLYLHVDQGVAARVTGDSLRIKQILFNWVSNAIKFTERGFIEVSVKLEAEEEGQQLLLI 716

Query: 762  AVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEG 821
             V+DTGIG+  D    +F+ F QAD S TR YGG GLGL+IS  L E+MGG I ++S   
Sbjct: 717  GVQDTGIGMNADTQARIFNIFEQADVSTTRSYGGAGLGLAISHTLAEMMGGDIILNSAPH 776

Query: 822  KGSTFEFSVVCGLQDAKMRDISQPVHGLADKRVLVVDDNDSARHILDSLLTAMRFNVVTV 881
             G+     +   L      +  + + GL   +  +   +   RH L   L ++   +V  
Sbjct: 777  LGTFIGLRI--RLPVVAQDEFDEQLQGL---QAYIAISDIKLRHTLSWHLASL--GIVLT 829

Query: 882  SNGFEALSEIQQKPFDMLFVDWNMPGMNGIELLTRVKTLGLRGHMKSFLVTAYGREINLD 941
             N   A         D+LF D                        +  L T +   +   
Sbjct: 830  QNKANA---------DLLFTD------------------NASDDRQHILCTHFNEALGYR 862

Query: 942  GENSKLVDALIVKPVNPSNLLDAIVTSYGIEHVRHKTNEAHHNSRPNFAGQSLLLVEDNE 1001
             +N + +  L V P+    + D    + G       T +     + N+    +LL+ED++
Sbjct: 863  YQNDQCL--LNVNPLTSQAVKDVCYINMGWIDTIVSTPQRDITLKVNWPECKILLIEDHQ 920

Query: 1002 VNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITATEHIRANP 1061
            +NQ +    L+   L+  +A HG +AL+ ++   +DL+L D +MPVMDG T T+ +RA  
Sbjct: 921  LNQILVQRQLKQLRLDCDIAEHGVQALDLMQQTHYDLILCDCRMPVMDGYTFTQQVRAQE 980

Query: 1062 -RWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFLQVSDEQSFSSH 1120
                 +PI+A+TAN +    +RC    M+D L+KP+ +++ +++L  +L           
Sbjct: 981  IDGQHVPIIALTANVLNEQKQRCAAVEMDDLLAKPLHLNELHEMLLKWL----------- 1029

Query: 1121 SPNKPSASKPAMNALLDLPQLTGVDLEQAIFRIGGNQQRYFEILRHFIDSQVDELNSVTG 1180
                   SKP   AL+D+       LE A     G ++   ++L  F     DEL S   
Sbjct: 1030 -----PHSKP---ALIDIK-----ILENAF----GRREALSKMLLMF----KDELESSLK 1068

Query: 1181 LIEAQDWSSATRVAHTLKGSAANLGLEALAQLAAEMEQSLEQQVLPSFEL-LQQAQSLLT 1239
             I+      A  + H   G+ + LGL ++A+ A  +E+ + Q+   + E+ L + ++++ 
Sbjct: 1069 DIQLTAPQLADNI-HRTAGTISMLGLTSIAEQAWLLEEKIRQEDSNNGEVELTEFRAIII 1127

Query: 1240 QVDDELSAWEH 1250
            Q+  EL+A  H
Sbjct: 1128 QLISELNAIIH 1138