Pairwise Alignments
Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056
Subject, 1080 a.a., sensor histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710
Score = 223 bits (569), Expect = 6e-62
Identities = 147/409 (35%), Positives = 226/409 (55%), Gaps = 20/409 (4%)
Query: 565 SFSDRADKVNGIVGILLDMTERKEMEDELRKA-----KEAADAMSQAKGDFLANMSHEIR 619
SF+ +++ +L + R EME R A +E A+ S+A DFLA ++HE+R
Sbjct: 219 SFNAMLERIEQRNRLLGEQRRRLEMEVSERTAEFVGARERAERESKAMADFLAAITHEVR 278
Query: 620 TPMNAILGMAHLALNTPLDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERID 679
TPM I+G+ ++L L+ R+++ + S+ LL +IN +LDFS++EAGKL +ERI
Sbjct: 279 TPMTGIIGLLDISLRGQLEPRLREHLEIVRSSSHALLDVINGVLDFSRIEAGKLRIERIP 338
Query: 680 FNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTS 739
F L + +++V + E+ + ++D+ +P + GDP RL QV+VN+ GNA KFT
Sbjct: 339 FALRESVEDVLDLFRAHLAERDVALVLDMASDLPCKVAGDPTRLRQVLVNIVGNAFKFTE 398
Query: 740 QGEIVLSARVSQLNEQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLG 799
QGEIV+ + + V LRFAV+DTG+GI + LF+ FSQAD S+ R++GG+GLG
Sbjct: 399 QGEIVVRISHERQGDGSVLLRFAVRDTGVGIPAEARKRLFEMFSQADASVARRFGGSGLG 458
Query: 800 LSISKQLVELMGGQITVHSEEGKGSTFEFSVVCGLQDAKMRDISQPVHGLADKRVLVVDD 859
L+I+++LV LMGG I V S G+G+ F F+V CG + S P+ RV++ +
Sbjct: 459 LAIARELVRLMGGSIEVDSTPGRGTVFRFTVHCGFVEGP----SDPLPLPQGVRVVLGES 514
Query: 860 NDSARHILDSLLTAMRFNVVTVSNGFEALSEIQQKPFDMLFVDWNMPGMNGIELLTRVKT 919
+ S + +L LL VV VS G AL + D+ + ++ G G+ L+R
Sbjct: 515 HASLQRVLSGLLRRWGAEVVAVS-GAAALKDAAADA-DVCVLSSHLQG--GLAALSRPGQ 570
Query: 920 LGLRGHMKSFLVTAYGREINLDGENSKLVDALIVKPVNPSNL---LDAI 965
G L+ YG E V A + +PV + L LDA+
Sbjct: 571 PG----PPVLLLVPYGEEPEPSLCAGAGVVAFVGRPVRAATLRAALDAV 615
Score = 78.2 bits (191), Expect = 4e-18
Identities = 98/426 (23%), Positives = 176/426 (41%), Gaps = 46/426 (10%)
Query: 841 DISQPVH----GLADKRVLVVDDNDSARHILDSLLTAMRFNVVTVSNGFEALSEIQQKPF 896
D Q VH GL RVLV +D+D +R +L +LT V ++G L+ P+
Sbjct: 682 DADQSVHEGGSGLEGMRVLVAEDDDVSRLVLREMLTGFGVQVNETADGATMLAHFAAAPY 741
Query: 897 DMLFVDWNMPGMNGIELLTRVKTLGLRGHMKSFLVTAYGREINLDGENSKLVDALIVKPV 956
D++ +D MP ++G L R++ L + L TA + E V ++ KP+
Sbjct: 742 DVVLIDVQMPVLDGFATLERLRALPDGDTVPVALFTAQKLSVAELAERGIRVAGVVEKPL 801
Query: 957 NPSNLLDAIVTSYGIEHVRHKTNEAHHNSRPNFAGQ--SLLLVEDNEVNQEVALGLLQDT 1014
L+ A + + + + A ++ P AGQ V D ++ A + +
Sbjct: 802 EMETLV-AFLRGLRAVKGQGRHDVAGADAAPRMAGQEHGESAVTDATLSPNAATLI---S 857
Query: 1015 GLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITATEHIRANPRWHSLPIVAMTAN 1074
G +V+ A R + +P G+ A + A+ H + T++
Sbjct: 858 GETLVLGGTADGAATR-----------GVGVP---GMAAVAEVIAS-GGHETETSSSTSD 902
Query: 1075 AMAIDIERCLQA-------GMNDHLSKPIEVDKFYQVLRHFLQVSDEQSFSSHSPNKPSA 1127
A A E G + H+ E + V+ + S +P + A
Sbjct: 903 ANASSFESGAATPSSIPGDGASSHM-PDAEASSVPAGVADVSAVAATTTSRSRAPRR-LA 960
Query: 1128 SKPAMNALLDLPQLTGVDLEQAIFRIGGNQQRYFEILRHFIDSQVDELNSVTGLIEAQDW 1187
P A L GVD+ + + R+GG + ++LR F+ + D + + ++EA D
Sbjct: 961 GPPLPTA------LEGVDIGEVLTRVGGKEWLLLKVLRSFVTAYADAADGLAAMVEAGDD 1014
Query: 1188 SSATRVAHTLKGSAANLGLEALAQ--LAAEM--EQSLEQQVLPSFELLQQAQSLLTQVDD 1243
+ HTL G+A N+ L LA EM ++S +Q ++ +F + ++T + +
Sbjct: 1015 EAVKLRGHTLAGAAGNISAHELRAICLALEMGGDKSTQQSLVAAFR--GELDRVVTSIRE 1072
Query: 1244 ELSAWE 1249
L+ +E
Sbjct: 1073 MLARYE 1078
Score = 65.5 bits (158), Expect = 3e-14
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 6/142 (4%)
Query: 968 SYGIEHVRHKTNEAHHNSRPNFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEA 1027
S G H +++ H G +L+ ED++V++ V +L G+ V G
Sbjct: 673 SVGASGDGHDADQSVHEGGSGLEGMRVLVAEDDDVSRLVLREMLTGFGVQVNETADGATM 732
Query: 1028 LERLEHADFDLVLMDMQMPVMDGITATEHIRANPRWHSLPIVAMTANAMAID--IERCLQ 1085
L A +D+VL+D+QMPV+DG E +RA P ++P+ TA +++ ER ++
Sbjct: 733 LAHFAAAPYDVVLIDVQMPVLDGFATLERLRALPDGDTVPVALFTAQKLSVAELAERGIR 792
Query: 1086 -AGMNDHLSKPIEVDKFYQVLR 1106
AG+ + KP+E++ LR
Sbjct: 793 VAGV---VEKPLEMETLVAFLR 811