Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1223 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  251 bits (640), Expect = 4e-70
 Identities = 144/395 (36%), Positives = 237/395 (60%), Gaps = 8/395 (2%)

Query: 579  ILLDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLD 638
            +L D+T RK+ E+++R +++ A AMS+ K  F+AN+SHE+RTP++ ILG+A +AL T  +
Sbjct: 819  LLQDVTSRKQWEEQMRASRDEAAAMSELKSQFVANISHEMRTPLSGILGIADVALTTEGN 878

Query: 639  TTQ-RKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKA 697
                R Y + +   A+ LLG+IND+LDFS++EAG++ +++++++L   + +  A ++++A
Sbjct: 879  PALLRNYFSMVQNVAEGLLGVINDLLDFSRLEAGRMPLDKVEYDLHTTVRDALAPLAMQA 938

Query: 698  QEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQ-LNEQQ 756
            + KG+   + +   +PL L GDPLRL Q++VNL GNAVKFT QG + +       +   +
Sbjct: 939  ERKGLALELHMQNGLPLTLRGDPLRLRQILVNLVGNAVKFTPQGTVHVDVSTGDGVTHDR 998

Query: 757  VTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITV 816
              L F ++DTG GI  +KL  +F++F+QAD S +RQ+ G+GLGL+IS+ LVEL GG I V
Sbjct: 999  ECLVFTIEDTGPGIPHEKLAHIFESFAQADGSYSRQHTGSGLGLAISRHLVELQGGDIGV 1058

Query: 817  HSEEGKGSTFEFSVVCGLQDAKMRDISQPVH-----GLADKRVLVVDDNDSARHILDSLL 871
             S  G+GS F F++  G      R   Q V           R+L+ +DN+  R  L   L
Sbjct: 1059 QSTPGEGSVFWFTLPLGDIHPARRTQRQRVDLDTRTPTTPLRILLAEDNELNREFLTIFL 1118

Query: 872  TAMRFNVVTVSNGFEALSEIQQKPFDMLFVDWNMPGMNGIELLTRVKTLG-LRGHMKSFL 930
                 +VVT  +G+E L  + ++  D++ +D  MP MNG+E    +++ G     +    
Sbjct: 1119 EEGGHSVVTACDGYEVLDILHREHVDLVLMDIQMPRMNGMEATRSIRSSGEAWSTVPVIA 1178

Query: 931  VTAYGREINLDGENSKLVDALIVKPVNPSNLLDAI 965
            +TA+    + D   ++ +   + KPV+ + L  AI
Sbjct: 1179 LTAHSMAGDRDRFIAEGMSDFVGKPVDRNELHAAI 1213



 Score = 90.5 bits (223), Expect = 9e-22
 Identities = 46/113 (40%), Positives = 75/113 (66%), Gaps = 1/113 (0%)

Query: 994  LLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITA 1053
            +LL EDNE+N+E     L++ G +VV A  G E L+ L     DLVLMD+QMP M+G+ A
Sbjct: 1101 ILLAEDNELNREFLTIFLEEGGHSVVTACDGYEVLDILHREHVDLVLMDIQMPRMNGMEA 1160

Query: 1054 TEHIRAN-PRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVL 1105
            T  IR++   W ++P++A+TA++MA D +R +  GM+D + KP++ ++ +  +
Sbjct: 1161 TRSIRSSGEAWSTVPVIALTAHSMAGDRDRFIAEGMSDFVGKPVDRNELHAAI 1213



 Score = 32.3 bits (72), Expect = 3e-04
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 2/82 (2%)

Query: 453 LSQNAEQQRLAERKVLEQSQLNQEIL--DATPNPMYCLSADGKFLTVNAKFLDLMGLYNN 510
           L+   +++RL   + L +S+    +L  +   + +   S D + +  +   L  MG+  N
Sbjct: 312 LALRQKRRRLVTERALAESERRYRVLVENFPESAVMLFSDDKRCMLADGAGLAAMGITAN 371

Query: 511 EVIDKEPQEIFPAEVAERFAAA 532
             I + PQE+ P   A   A A
Sbjct: 372 SAIGRSPQELLPTHAAPPLAEA 393