Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1435 a.a., histidine kinase from Burkholderia phytofirmans PsJN

 Score =  276 bits (707), Expect = 8e-78
 Identities = 209/650 (32%), Positives = 328/650 (50%), Gaps = 47/650 (7%)

Query: 578  GILLDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPL 637
            G  +D +      DEL +A++ A+A S+AK DF A MSHEIRTPMN +LG+  +   TPL
Sbjct: 760  GYWVDASLEHARSDELARARDLAEAASRAKDDFFAMMSHEIRTPMNGVLGLVEVLERTPL 819

Query: 638  DTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKA 697
            +  Q + +  I+ESA  LL I++D+LD+SK+EAG+L +E    +L +++DN   +++ +A
Sbjct: 820  NADQGEMLGMIHESAGALLQILDDLLDYSKIEAGRLTIEAESIDLRELVDNAVGLLAGRA 879

Query: 698  QEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQV 757
             EKG++  +DI P +   L GD +RL Q++ NL GNA+KFT QGE+ +   V    +   
Sbjct: 880  HEKGLKVRVDIGPDVAATLRGDSVRLRQILFNLLGNAIKFTPQGEVDVCVSVVAEGDGIQ 939

Query: 758  TLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVH 817
            TL   V+DTGIGIA +    LF+ F QA++S TR++GGTGLGL+I ++L++LM G +T+ 
Sbjct: 940  TLEMVVEDTGIGIAPEVQAKLFEPFVQAESSTTRRFGGTGLGLTICRKLIDLMNGSLTLR 999

Query: 818  SEEGKGSTFEFSVVCGLQDAKMRDISQPVHGLADKRVLVVDDNDSARHILDSLLTAMRFN 877
            SE G G+     +   ++  +       V+GL  KR +V   +      L     A+   
Sbjct: 1000 SEPGSGTCMTVRLAMPVETPR-----YSVNGLRGKRGIVATGDARVAQALMHFGEALGLK 1054

Query: 878  VVTVS------NGFEALSEIQQKPFDMLFVDWNM-------PGMNGIELLTRVKTLGLRG 924
            +  VS      +   AL+EI     D+LF+  ++       P    I L  + K  G R 
Sbjct: 1055 LRHVSPDAPELHDRAALAEI-----DLLFLSEDVILPADMRPRTRFICLTEKPKPTGYRI 1109

Query: 925  HMKSFLVTAYGREINLDGENSKLVDALIVKP-VNPSNLLDAIVTSYGIEHVRHKTNEAHH 983
               +  V+     I+  G  +    A+   P   P +   +    +G             
Sbjct: 1110 LDDNVRVSI--NPISWRGLGAACAAAMTGLPSAGPRSAAMSRTPEFGA--------SPPD 1159

Query: 984  NSRPNFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDM 1043
              R   +G+ +L+ ED+ VNQE+    L   G    VAN G EAL  LEH  +  ++ D 
Sbjct: 1160 RERAIASGRLILVAEDHPVNQELIRHQLALLGFACDVANDGAEALAALEHTSYGCLITDC 1219

Query: 1044 QMPVMDGITATEHIRANPR--WHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKF 1101
             MP + G   T  IR N +   + LPI+ +TAN    D+  C  AGM+D L KP  +   
Sbjct: 1220 HMPNVSGYELTRRIRENEQDGAYRLPILGITANTAPEDLNLCRDAGMDDSLVKPTRLATL 1279

Query: 1102 YQVL-RHFLQVSDEQSFSSHSPNKPSASKPAMNALLDLPQLTGVDLEQAIFRIGGNQQRY 1160
               L R F   S  Q+  S + + P+ + P +           VDL   + ++ G++   
Sbjct: 1280 RDYLSRWFGTDSAWQAAPSEAVSTPAVAVPDVRG--GAQPFVPVDLAH-MTQLWGSESTV 1336

Query: 1161 FEILRHFIDSQVDELNSVTGLIEAQDWSSATRV------AHTLKGSAANL 1204
              +L  F+ S  +++ S++ L+E  + S  T V       H + G+A+ L
Sbjct: 1337 KALLDSFVSSVREDVQSLSPLLERVE-SERTEVERVREWLHRVAGAASVL 1385



 Score = 33.1 bits (74), Expect = 2e-04
 Identities = 16/78 (20%), Positives = 35/78 (44%)

Query: 443 MLDDLSVAIQLSQNAEQQRLAERKVLEQSQLNQEILDATPNPMYCLSADGKFLTVNAKFL 502
           +L  L   + L +    ++  ER++  Q    + ++   P P+     DG++L VN  + 
Sbjct: 493 LLITLRAYLLLQREVRLRKKTERELELQLNFQETLMKTVPYPLVAKDLDGRYLAVNEAYE 552

Query: 503 DLMGLYNNEVIDKEPQEI 520
              GL  + V+ +   ++
Sbjct: 553 QACGLSRDAVVGRTSLQV 570