Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1767 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  524 bits (1350), Expect = e-152
 Identities = 333/880 (37%), Positives = 496/880 (56%), Gaps = 32/880 (3%)

Query: 462  LAERKVLEQSQLNQE-----ILDATPNPMYCLSADGKFLTVNAKFLDLMGLYNNEVIDKE 516
            + ERK +E+     E     + D +   +  + A G  L  N ++ + MG     +    
Sbjct: 889  ITERKAIEEELAVSEAHFKALFDGSTIGIVNVDAKGVILDCNDQYCEDMGQTRESLCGVP 948

Query: 517  PQEIFPAEVAERFAAAHQVLTQQQSSQ-NYEVSLVDYTGVQREMLVYEASFSDRADKVNG 575
              ++   +  E   A  + L + +      E S +   G    M V  ++  D   +   
Sbjct: 949  IFDVLSLQDKETAKAQFRELAEGKVDHYRGERSFIRPNGEPLWMTVNVSALFDSQKQFES 1008

Query: 576  IVGILLDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNT 635
             V  ++DMTE K + DEL  AKE ADA S+AKGDFLANMSHEIRTPMNAI+GM+ L L T
Sbjct: 1009 AVVSMVDMTELKLLSDELLVAKEEADAASKAKGDFLANMSHEIRTPMNAIIGMSQLCLQT 1068

Query: 636  PLDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSL 695
             LD  Q+ YV +I  ++K+LL IINDILDFSK+EAGKL++E + F LD +L++++ + S 
Sbjct: 1069 ALDKKQKNYVEKIERASKSLLSIINDILDFSKIEAGKLDIESVPFQLDTMLEDLSDMFSE 1128

Query: 696  KAQEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQ 755
            KA  K +E L  + P++P  L GD LRLGQV++NL  NA+KFT +GE++LS  + +    
Sbjct: 1129 KAAHKQLELLFAVAPNVPRHLFGDSLRLGQVLINLMNNAIKFTERGEVLLSLNLVEQQND 1188

Query: 756  QVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQIT 815
             V LRF+V+D+GIG+  D+   LF +FSQAD S TR+YGGTGLGL+I KQLVELMGG I 
Sbjct: 1189 DVVLRFSVRDSGIGLTADQQAKLFKSFSQADTSTTRKYGGTGLGLAICKQLVELMGGTIG 1248

Query: 816  VHSEEGKGSTFEFSVVCGLQDAKMRDISQPVHGLADKRVLVVDDNDSARHILDSLLTAMR 875
            V S+ G GSTF F+V   +   +   ++Q + G+    +LV DDN +AR I+ + L +M 
Sbjct: 1249 VESQFGHGSTFYFTVKLQISSGQKLTVAQELEGMP---ILVADDNATARDIMRTTLESMG 1305

Query: 876  FNVVTVSNGFEALSEIQQKPFDMLFVDWNMPGMNGIELLTRVKTLGLRGHMKSFLVTAYG 935
            F V TV +G EA++   Q+ + +  +DW MP ++GIE   ++K    +   +  +V+A+ 
Sbjct: 1306 FRVDTVRSGEEAVTRCIQQEYAVALIDWKMPNLDGIETAKQIKQQAKKA-PRILMVSAHA 1364

Query: 936  REINLDGENSKLVDALIVKPVNPSNLLDAIVTSY---GIEHVRHKTNEAHHNSRPNFAGQ 992
             +  L       +   I KP++ S LLD I+ S    G+  VR ++            G+
Sbjct: 1365 NQDFLSQIEELGLAGYISKPISASRLLDGIINSLGRAGVLPVRRQSESIDPKLLLPLKGK 1424

Query: 993  SLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGIT 1052
             +LLVEDNE+N EVA   L+  G+ + +A +GQ AL++LE   FDLVLMD QMPVMDG  
Sbjct: 1425 RILLVEDNEMNLEVATEFLEQVGIILSIATNGQIALDKLEQQSFDLVLMDCQMPVMDGYQ 1484

Query: 1053 ATEHIRANPRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFLQVS 1112
            AT+ +R  P    LP+VAMTANAMA D E CL+AGMNDH++KPIEV+  YQ L  +L  S
Sbjct: 1485 ATQALRKRPELTELPVVAMTANAMAGDKEMCLRAGMNDHIAKPIEVNLLYQTLLKYLGGS 1544

Query: 1113 ------DEQSFSSHSPNKPSASKPAMNALLDLPQLTGVDLEQAIFRIGGNQQRYFEILRH 1166
                   E S     P KP        +++  P+   +D+++ +  +  + + Y      
Sbjct: 1545 ASLVDNTEPSQLVDIPVKP--INLDSESVVKWPEHPELDIDRGLQLVQNSTRLYQRSFDR 1602

Query: 1167 FIDSQVDELNSVTGLIEAQDWSSATRVAHTLKGSAANLGLEALAQLAAEMEQSLEQQVLP 1226
            F+ SQ + ++ +   +       A R+AHTLKG A NL    L +LA ++E  L ++   
Sbjct: 1603 FVTSQRNVVDLINKALANDKRDDAVRMAHTLKGLAGNLSSSKLVELARQLELHLSEKSEY 1662

Query: 1227 SFELLQQAQSLLTQVDDELSAWEHQHK-------EPLLAENLDWGLWYQQLQQAINDYDV 1279
              E L Q Q+L+  + D +   + Q +       E L  E L   L  +QL+Q++ D D 
Sbjct: 1663 QTE-LDQIQALVASICDAIERVKPQFEESTTSTSEQLSPEALVTAL--KQLRQSLEDADS 1719

Query: 1280 TALSLSKSIR-QVSQWDSAQQAALISAIEDFDFEQAKALL 1318
             A++   +++ QVS     Q +  ++ I  + F++A  L+
Sbjct: 1720 DAVAQIDALKPQVSSKLWLQLSPALTMINQYQFDEAVDLI 1759