Pairwise Alignments

Query, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1122 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  268 bits (685), Expect = 2e-75
 Identities = 174/540 (32%), Positives = 284/540 (52%), Gaps = 26/540 (4%)

Query: 428 TVGMLTMQQYHWLSQMLDDLSVAIQLSQNAEQQRLAERKVLEQSQLNQEILDATPNPMY- 486
           ++G +   + H+    + DLS   Q ++  ++ ++ E K        + ++   P   Y 
Sbjct: 373 SIGHVMQGKAHYFVGFISDLS---QRNEMEQELKINEAKF-------RSLITNIPGIAYR 422

Query: 487 CLSADG-KFLTVNAKFLDLMGLYNNEVIDKEPQEIF-----PAEVAERFAAAHQVLTQQQ 540
           C S +G   + ++    ++ G    +     P+  F     P ++   +A A      Q 
Sbjct: 423 CKSTEGWPMVFISDAVQNITGYPAEDFELPHPKRFFSDLYHPDDIETIYAQA------QP 476

Query: 541 SSQNYEVSLVDYTGVQREMLVYEASFSDRADKVNGIVGILLDMTERKEMEDELRKAKEAA 600
            + + E  ++   G  R +  +     D   K   I G L+D+TERKEME +L  AK  A
Sbjct: 477 PTFSMEYRIIRADGGVRWLFEHGNYILDETSKEVWIDGFLMDITERKEMEQDLVTAKNNA 536

Query: 601 DAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINESAKNLLGIIN 660
           +  + A+  FLANMSHEIRTPMNAI+G + + L + LD  Q+K ++ IN SAK+LL ++N
Sbjct: 537 EQAAAARAAFLANMSHEIRTPMNAIIGFSDILLESVLDLEQQKQLSTINRSAKSLLHLLN 596

Query: 661 DILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDPHIPLGLIGDP 720
           D+LD +K++ GKL +E   F L D +D V + + L+A+++ +   +D+ P +    IG P
Sbjct: 597 DVLDSAKLDKGKLELENRVFCLTDEIDTVISTLWLQAKKQRLSLEVDVAPTMAANFIGSP 656

Query: 721 LRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQVTLRFAVKDTGIGIAQDKLDDLFD 780
            R+ QV++NL GNAVKFT +G + +        +    + F + DTGIG++ ++L+ +F+
Sbjct: 657 ERIRQVLINLIGNAVKFTCEGTVTVRVFPQDTTQDTTKITFEIIDTGIGMSPEQLNRVFE 716

Query: 781 AFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSVVCGLQDAKMR 840
           AF+QAD S++R+YGGTGLG +ISKQLVELMGG++T  S  G+GSTF F++        + 
Sbjct: 717 AFAQADASMSRKYGGTGLGTTISKQLVELMGGELTAESTLGQGSTFRFTIPLQPSSEPLS 776

Query: 841 DISQPVHGLADKRVLVVDDNDSARHILDSLLTAMRFNVVTVSNGFEALSEIQQKPFDMLF 900
                   L    +LVVDD      +L   LT     V+T  +G +AL  +Q+   D+  
Sbjct: 777 TQRADNGSLPPLTLLVVDDIQQNIDLLSVWLTRQGHKVITARDGEQALLRMQKADIDITL 836

Query: 901 VDWNMPGMNGI---ELLTRVKTLGLRGHMKSFLVTAYGREINLDGENSKLVDALIVKPVN 957
           +D  MP M+G+   ++    +      HM    +TA   E +        +D    KP++
Sbjct: 837 MDLQMPVMDGLTAAKMRREQEAESQLPHMPIIALTASVLEQDKSAAEQAGMDGFANKPID 896



 Score =  103 bits (256), Expect = 1e-25
 Identities = 80/271 (29%), Positives = 138/271 (50%), Gaps = 26/271 (9%)

Query: 978  TNEAHHNSRPNFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFD 1037
            T  A + S P     +LL+V+D + N ++    L   G  V+ A  G++AL R++ AD D
Sbjct: 777  TQRADNGSLPPL---TLLVVDDIQQNIDLLSVWLTRQGHKVITARDGEQALLRMQKADID 833

Query: 1038 LVLMDMQMPVMDGITATEHIR---ANPRWHSLPIVAMTANAMAIDIERCLQAGMNDHLSK 1094
            + LMD+QMPVMDG+TA +  R   A  +   +PI+A+TA+ +  D     QAGM+   +K
Sbjct: 834  ITLMDLQMPVMDGLTAAKMRREQEAESQLPHMPIIALTASVLEQDKSAAEQAGMDGFANK 893

Query: 1095 PIEVDKFYQVLRHFLQVSDEQSFSSHSPNKPSASKPAMNALLDLPQLTGVDLEQAIFRIG 1154
            PI+     + +   LQ+        + P     S P ++ LL + +  GV       ++ 
Sbjct: 894  PIDFALLTREIARVLQL--------NPPQAEFESLPPVSTLL-VDEAKGV-------KLW 937

Query: 1155 GNQQRYFEILRHFIDSQVDELNSVTGLIEAQDWSSATRVAHTLKGSAANLGLEALAQLAA 1214
            G++  + + L  FI    ++  ++   +  QD ++   ++H+LKG + NLGL        
Sbjct: 938  GSKPLFIKELMKFIAQWPEKSQALQQAMSGQDTATIKLLSHSLKGVSGNLGLLQWMAHFG 997

Query: 1215 EMEQSLEQQVLPSFELLQQAQSLLTQVDDEL 1245
            ++EQ L Q   PS E +   ++++ Q+ D L
Sbjct: 998  QLEQ-LAQAESPSREAM---EAIVAQISDSL 1024