Pairwise Alignments

Query, 379 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., two-component system regulatory protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  204 bits (519), Expect = 3e-57
 Identities = 119/337 (35%), Positives = 178/337 (52%), Gaps = 33/337 (9%)

Query: 11  ILIVDDSPDNIAFMSQGLAQYYRIKAARSGKVALEILAQYPIDLVLLDIVMPEMSGYEVI 70
           +L VDD   N+A + Q L   Y +  A+SG  AL+ +A++   L+LLD+ +P+M GY V 
Sbjct: 6   LLCVDDESSNLATLRQLLRDDYPLVFAKSGGEALDAVARHAPALILLDVELPDMDGYAVA 65

Query: 71  NQIKHNPHTEHIPVIFLTGKSNPEDEQLGFELGAVDYVFKPVSIPLLKSRVHTHLQNKRS 130
             +K +P +  IP++F+T +S   DE+ G E GA DYV +P S  LLK+R+ THL     
Sbjct: 66  RTLKQDPDSTAIPILFVTSRSTEHDERTGLEAGAADYVSRPYSAALLKARIATHL----- 120

Query: 131 KDILLNQNDYLETEVLRRSGELDRMQDAVVFALASLAETRDPETGNHLLRTQHYVKVLAQ 190
                          L  +  L +     +  L +  + +D +TG H+ R   Y ++LA+
Sbjct: 121 --------------TLAENARLAQQYRDAIHLLGTAGQGQDADTGAHIWRMAAYARLLAE 166

Query: 191 RLATTDKYRDVLSPTVIDTYFKAAPLHDIGKVGIPDNILLKPGKLTPDEFTTMRNHALLG 250
           ++        +L          AAPLHD GK+ +P +IL KP  L   E   +R H  +G
Sbjct: 167 KVGWPPAQAQLLE--------DAAPLHDAGKIVVPGSILHKPDTLDEHEREVVRQHPQVG 218

Query: 251 KLALEKAEKLSGACTALINVAKEIAMGHHEKWDGSGYPLGLKGDDIPLSARLMALADVYD 310
                  + L      L  +A +IA+ HHE WDGSGYP G+ GD IP +AR++A+ADV+D
Sbjct: 219 H------DLLRHGRGPLFQLAADIALHHHECWDGSGYPQGVAGDAIPEAARIVAVADVFD 272

Query: 311 ALICRRVYKEPMSHEEAKAIILQGRGSHFDPMVIDAF 347
           AL  RR YK P + E+A   +    G   +P ++ AF
Sbjct: 273 ALCGRRAYKAPWAVEDAMRKLDSMAGKQLEPRLVHAF 309