Pairwise Alignments

Query, 379 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  278 bits (710), Expect = 2e-79
 Identities = 146/342 (42%), Positives = 212/342 (61%), Gaps = 21/342 (6%)

Query: 6   LSQCTILIVDDSPDNIAFMSQGLAQYYRIKAARSGKVALEILAQYPIDLVLLDIVMPEMS 65
           + + T+L+VDD+P+NI  +   L Q Y++K A  G  AL +  + P DL+LLD++MP MS
Sbjct: 1   MEKATVLVVDDTPENIDILVGILGQDYKVKVAIDGPRALALALKSPPDLILLDVMMPGMS 60

Query: 66  GYEVINQIKHNPHTEHIPVIFLTGKSNPEDEQLGFELGAVDYVFKPVSIPLLKSRVHTHL 125
           GYEV  ++K  P T HIPVIF+T  +   DE  GFELGAVDY+ KPVS P++K RV THL
Sbjct: 61  GYEVCRRLKQEPMTAHIPVIFVTALAEVADETQGFELGAVDYITKPVSAPIVKVRVKTHL 120

Query: 126 QNKRSKDILLNQNDYLETEVLRRSGELDRMQDAVVFALASLAETRDPETGNHLLRTQHYV 185
                   L +Q   LE +V  R+ EL++ +  ++  L   AE +D ETG H++R  HY 
Sbjct: 121 -------ALYDQKRLLEEQVRERTKELEQTRFEIIRRLGRAAEYKDNETGLHVVRMSHYA 173

Query: 186 KVLAQRLATTDKYRDVLSPTVIDTYFKAAPLHDIGKVGIPDNILLKPGKLTPDEFTTMRN 245
           ++LA++    + + ++L        + AAP+HDIGK+G PD +L KP KL  +E+  M+ 
Sbjct: 174 RLLARQAGLPEPFCELL--------YNAAPMHDIGKIGTPDAVLKKPAKLDAEEWEIMQQ 225

Query: 246 HALLGKLALEKAEKLSGACTALINVAKEIAMGHHEKWDGSGYPLGLKGDDIPLSARLMAL 305
           HA +G      AE +      L+ +++ IA+ HHEKWDGSGYP GL G +IP+  R++A+
Sbjct: 226 HASIG------AEIIGEHPDPLLQMSRRIALTHHEKWDGSGYPNGLSGTEIPIEGRIVAI 279

Query: 306 ADVYDALICRRVYKEPMSHEEAKAIILQGRGSHFDPMVIDAF 347
           ADV+DAL   R YK+  S E+  A++    G  FDP ++D F
Sbjct: 280 ADVFDALTSIRPYKKAWSIEDTMALLESEAGKQFDPELVDHF 321