Pairwise Alignments

Query, 379 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., response regulator containing a CheY-like receiver domain and an HD-GYP domain from Dechlorosoma suillum PS

 Score =  394 bits (1013), Expect = e-114
 Identities = 200/366 (54%), Positives = 264/366 (72%), Gaps = 1/366 (0%)

Query: 1   MSMEDLSQCTILIVDDSPDNIAFMSQGLAQYYRIKAARSGKVALEILAQYPI-DLVLLDI 59
           ++++  ++  IL+VDD+PDN+  M++ L   Y IK A +G+ AL + A  P  DL+LLDI
Sbjct: 3   LNLDFTTRPVILVVDDTPDNLTLMAELLQDRYAIKVANNGERALRVAAGTPPPDLILLDI 62

Query: 60  VMPEMSGYEVINQIKHNPHTEHIPVIFLTGKSNPEDEQLGFELGAVDYVFKPVSIPLLKS 119
           +MP+M G EV  +++ +P T  IP IFLT +S  EDE+ GFELGAVDY+ KPVS P+L +
Sbjct: 63  MMPDMDGLEVARRLRADPATRDIPFIFLTARSQIEDERQGFELGAVDYITKPVSPPILLA 122

Query: 120 RVHTHLQNKRSKDILLNQNDYLETEVLRRSGELDRMQDAVVFALASLAETRDPETGNHLL 179
           RVHTHL  K +KD L +QN YLE+EV RR+ E+  +QD  + A+ASLAETRD ETGNH+ 
Sbjct: 123 RVHTHLTLKAAKDFLKDQNAYLESEVQRRTQEVSMIQDVTIMAMASLAETRDNETGNHIR 182

Query: 180 RTQHYVKVLAQRLATTDKYRDVLSPTVIDTYFKAAPLHDIGKVGIPDNILLKPGKLTPDE 239
           RTQ+YV++LA++L    ++   LS   I+  +K+APLHDIGKVGIPD ILLKPGKLTP+E
Sbjct: 183 RTQNYVRILARQLQGHPRFAAFLSDANIELLYKSAPLHDIGKVGIPDRILLKPGKLTPEE 242

Query: 240 FTTMRNHALLGKLALEKAEKLSGACTALINVAKEIAMGHHEKWDGSGYPLGLKGDDIPLS 299
           F  M+ H  LG+ A+  AE    +    +  A++IA  H EKWDGSGYPLGL+GD+IP++
Sbjct: 243 FEIMKTHTTLGRDAILHAEVRLNSPNTFLRFARDIAYAHQEKWDGSGYPLGLRGDEIPVA 302

Query: 300 ARLMALADVYDALICRRVYKEPMSHEEAKAIILQGRGSHFDPMVIDAFLIEEQNFIDIAQ 359
           ARLMA+ADVYDALI RRVYK P  HE+A  II +GRG HFDP ++DAFL   ++F  IA 
Sbjct: 303 ARLMAVADVYDALISRRVYKPPFPHEQAVQIISEGRGKHFDPDMVDAFLQVAEDFRSIAA 362

Query: 360 KFADEE 365
            FAD E
Sbjct: 363 TFADTE 368