Pairwise Alignments

Query, 379 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1346 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 99.8 bits (247), Expect = 4e-25
 Identities = 59/148 (39%), Positives = 92/148 (62%), Gaps = 5/148 (3%)

Query: 11   ILIVDDSPDNIAFMSQGLAQYYRIKAARSGKVALEILAQYPIDLVLLDIVMPEMSGYEVI 70
            ILIV+D+ +   ++SQ LA+ Y ++   +GK AL I+ +Y  +LV+ DI+MPEM G E+ 
Sbjct: 1071 ILIVEDNDELRNYLSQTLAEEYTVQNCCNGKEALTIIPEYKPELVISDIMMPEMRGDELC 1130

Query: 71   NQIKHNPHTEHIPVIFLTGKSNPEDEQLGFELGAVDYVFKPVSIPLLKSRVHTHLQNK-- 128
            + IK+N  T HIPVI LT  +N +D   G ++GA +Y+ KP +I +LK+ V   L N+  
Sbjct: 1131 DAIKNNIETSHIPVILLTALNNEKDILSGLQIGADEYIVKPFNIGILKATVSNLLINRAL 1190

Query: 129  -RSK--DILLNQNDYLETEVLRRSGELD 153
             RSK   + ++  D  E E +  S ++D
Sbjct: 1191 LRSKYGSLDMDDEDDHEDECINCSQDID 1218