Pairwise Alignments

Query, 379 a.a., two-component system response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., response regulator receiver modulated diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  108 bits (269), Expect = 3e-28
 Identities = 72/202 (35%), Positives = 109/202 (53%), Gaps = 19/202 (9%)

Query: 1   MSMEDLSQCTILIVDDSPDNIAFMSQGLAQYYRIKAARSGKVALEILAQYPIDLVLLDIV 60
           M+ +  ++  ILIVDD P NI  + Q   + Y +  A SG+ AL++  +   DLVLLDI 
Sbjct: 8   MATQQATKGKILIVDDQPLNIKILHQLFHEEYEMFMATSGEQALQVCQKMQPDLVLLDIE 67

Query: 61  MPEMSGYEVINQIKHNPHTEHIPVIFLTGKSNPEDEQLGFELGAVDYVFKPVSIPLLKSR 120
           MPEM+GYEV  ++K +P T +I VIF+T   +  +E  GF+LGAVD++ KP++  +  +R
Sbjct: 68  MPEMTGYEVCQRLKADPATANIGVIFITAHFDEMEEVKGFQLGAVDFIHKPINPIITSAR 127

Query: 121 VHTHLQNKRSKDILLNQNDYLETEVLRRS--GELDRMQDAVVFALASLAETRDPETGNHL 178
           V       +++ +L  Q+D L +  L  S  G  +R Q           E R PE   H 
Sbjct: 128 V-------KNQYLLKRQSDVLHSIALLDSLTGVANRRQ----------FEQRLPEIWRHC 170

Query: 179 LRTQHYVKVLAQRLATTDKYRD 200
            R Q Y+ V+   +    +Y D
Sbjct: 171 SRNQAYLSVIMLDVDFFKRYND 192