Pairwise Alignments

Query, 368 a.a., peptidase M20 from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., succinyl-diaminopimelate desuccinylase (RefSeq) from Shewanella amazonensis SB2B

 Score = 61.2 bits (147), Expect = 4e-14
 Identities = 84/364 (23%), Positives = 141/364 (38%), Gaps = 37/364 (10%)

Query: 15  QLIQIDSESGNEKKIAETLAEQLGELGFTVHKLPVPAEVSNGFNLYARLEGTLNDSILFS 74
           +LI   S +  ++   + +A++L  +GFT+     P    +  NL+AR  GT      F+
Sbjct: 16  ELISRPSVTPLDEGCQDLMAKRLAAIGFTIE----PMVFEDTTNLWAR-RGTEGPVFCFA 70

Query: 75  CHMDTVKPGI-------GIEPVIEDGIIRSKGNTILGGDDKSGIAA-ILEAVRVLRDSQQ 126
            H D V  G          +PV+ DG I  +G      D K  +AA ++ A R + +   
Sbjct: 71  GHTDVVPVGDLNRWHTPPFDPVVIDGYIHGRG----AADMKGSLAAMVVAAERFVAEHPD 126

Query: 127 AHKTIEIAFTVHEEGGLKGSEHFDMSKVQA--EKAIVLDTGGP-----IGTIVR-AAPGQ 178
              +I    T  EEG         +  ++A  EK      G P     +G +V+    G 
Sbjct: 127 HQGSIAFLITSDEEGPFINGTVRVVETLEARHEKITWALVGEPSSTHLLGDVVKNGRRGS 186

Query: 179 QKIVALIKGKPAHAGLVPEDGISAIAVAADAITQMKLLRIDE------ETTANIGIVQGG 232
                 +KG   H    P    + I  AA A+ ++  +  D+       T+  I  + GG
Sbjct: 187 LTGNLTVKGIQGHVAY-PHLADNPIHRAAPALAELSRIEWDKGNEFFPPTSFQIANINGG 245

Query: 233 Q-ATNIVMPELKIVAEARSLNDAKLEAQVQHMIETFERAAEKHGATVEIESTRAYNAFKL 291
             A+N++  ELK++   R   +   E  +  ++   +     HG   +I+       F  
Sbjct: 246 TGASNVIPGELKVMFNFRYSTEVTAETLIARVLGILDA----HGLDYDIDWVFNGLPFLT 301

Query: 292 EEDNAHIQAIKASFETIGIEPKTKLSGGGSDANNFNAKGLTTVNLSTGMAKVHTTEEYIA 351
            E        +A FE  G     + +GG SD       G   + L    A +H   E + 
Sbjct: 302 GEGPLLDATREAIFEVTGTHTDPQTTGGTSDGRFIAPTGAQVIELGPVNATIHKVNECVK 361

Query: 352 IADM 355
            +D+
Sbjct: 362 ASDL 365