Pairwise Alignments

Query, 400 a.a., 2-methylaconitate cis-trans isomerase PrpF from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., 3-methylitaconate isomerase from Pseudomonas fluorescens FW300-N2C3

 Score =  565 bits (1457), Expect = e-166
 Identities = 280/390 (71%), Positives = 328/390 (84%), Gaps = 4/390 (1%)

Query: 6   PQIRIPATYMRGGTSKGVFFRLNDLPLEAQLPGAARDALLLRVIGSPDPYGKQIDGMGGA 65
           PQI+IPATYMRGGTSKGVFF L DLP  A++PG  RDALLLRVIGSPDPY KQIDGMGGA
Sbjct: 5   PQIKIPATYMRGGTSKGVFFSLQDLPEAARVPGPVRDALLLRVIGSPDPYEKQIDGMGGA 64

Query: 66  TSSTSKTVIVSASSRTDHDVDYLFGQVAIDKPFVDWSGNCGNLSAAVGPFAIHAGLIPAE 125
           TSSTSKTVI+S S+R DHDVDYLFGQV+IDKPFVDWSGNCGNLSAAVG FAI +GL+ ++
Sbjct: 65  TSSTSKTVILSRSTRADHDVDYLFGQVSIDKPFVDWSGNCGNLSAAVGSFAISSGLVASD 124

Query: 126 CIPHNGVVAVKVWQVNISKTIVVHVPIVNGAVQECGEFELDGVTFAAAEVQVDFVDPADD 185
            IP NGV  V++WQ NI KTI+ HVPI  G VQE G+FELDGVTF AAEVQ++F+DPA +
Sbjct: 125 RIPQNGVAVVRIWQANIGKTIIAHVPITEGVVQETGDFELDGVTFPAAEVQLEFMDPAAE 184

Query: 186 S----GAMFPTGNVMDDLQVPGIGTLNATFINSGIPTIFVDAEALGYQGTELQEAINSDP 241
                G+MFPTGN++DDL+VPG+GT  AT IN+GIPTIF++A  +GY GTELQ AINSDP
Sbjct: 185 EEGGGGSMFPTGNLVDDLEVPGVGTFKATLINAGIPTIFINARDVGYTGTELQGAINSDP 244

Query: 242 QALAKFETLRAYGALKMGLIERIEEAQNRQHTPKIAFVSGAKSYLASSGKRVEADSVDLL 301
           +ALA FET+RA+GAL+MGLI+ ++EA  RQHTPK+AFV+    YL+SSGK V A  VDLL
Sbjct: 245 KALAMFETIRAHGALRMGLIKHLDEAAQRQHTPKVAFVAPPADYLSSSGKAVAAGDVDLL 304

Query: 302 VRALSMGKLHHAMMGTAAVAIASAAAVPGTLVNLAAGGGERTSVTFGHPSGTLKVGAKAK 361
           VRALSMGKLHHAMMGTAAVAI +AAA+ GTLVNLAAGG ER +V FGHPSGTL+VGA+A 
Sbjct: 305 VRALSMGKLHHAMMGTAAVAIGTAAAISGTLVNLAAGGIERNAVRFGHPSGTLRVGAEAS 364

Query: 362 QGKQGWQIERAIMSRSARILMEGWVRVPAN 391
                W +++AIMSRSAR+LMEG+VRVP +
Sbjct: 365 VVNGEWTVKKAIMSRSARVLMEGFVRVPGD 394